Hb_000656_360

Information

Type -
Description -
Location Contig656: 320294-322914
Sequence    

Annotation

kegg
ID rcu:RCOM_0651660
description flavonoid 3-hydroxylase, putative (EC:1.14.13.88)
nr
ID XP_012068872.1
description PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
swissprot
ID P24465
description Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2
trembl
ID A0A067L877
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24689 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 71a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000656_360 0.0 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
2 Hb_003847_140 0.056841224 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
3 Hb_029866_140 0.0638210618 - - PREDICTED: hevamine-A [Jatropha curcas]
4 Hb_176149_010 0.0743546009 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
5 Hb_066262_010 0.0860992434 - - hypothetical protein JCGZ_14798 [Jatropha curcas]
6 Hb_119441_010 0.0865267952 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
7 Hb_000369_150 0.0878139936 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
8 Hb_004656_030 0.0910984029 - - putative pectin methylesterase family protein [Populus trichocarpa]
9 Hb_001376_020 0.0961600192 - - hypothetical protein JCGZ_01547 [Jatropha curcas]
10 Hb_027913_010 0.0979815064 - - ankyrin repeat-containing protein, putative [Ricinus communis]
11 Hb_133646_010 0.0983314547 - - hypothetical protein RCOM_1044030 [Ricinus communis]
12 Hb_008707_020 0.0989965623 - - ATP binding protein, putative [Ricinus communis]
13 Hb_001749_020 0.0993001224 - - hypothetical protein CISIN_1g042220mg, partial [Citrus sinensis]
14 Hb_004586_380 0.0995589935 - - purine transporter, putative [Ricinus communis]
15 Hb_005643_010 0.1031727737 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
16 Hb_004098_010 0.1042066935 - - -
17 Hb_000879_100 0.1047465637 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
18 Hb_001331_050 0.1052912757 - - hypothetical protein VITISV_022439 [Vitis vinifera]
19 Hb_006351_080 0.1060064682 - - hypothetical protein B456_011G275400 [Gossypium raimondii]
20 Hb_004161_010 0.1063421697 - - hypothetical protein JCGZ_21278 [Jatropha curcas]

Gene co-expression network

sample Hb_000656_360 Hb_000656_360 Hb_003847_140 Hb_003847_140 Hb_000656_360--Hb_003847_140 Hb_029866_140 Hb_029866_140 Hb_000656_360--Hb_029866_140 Hb_176149_010 Hb_176149_010 Hb_000656_360--Hb_176149_010 Hb_066262_010 Hb_066262_010 Hb_000656_360--Hb_066262_010 Hb_119441_010 Hb_119441_010 Hb_000656_360--Hb_119441_010 Hb_000369_150 Hb_000369_150 Hb_000656_360--Hb_000369_150 Hb_003847_140--Hb_066262_010 Hb_008707_020 Hb_008707_020 Hb_003847_140--Hb_008707_020 Hb_005081_060 Hb_005081_060 Hb_003847_140--Hb_005081_060 Hb_011924_030 Hb_011924_030 Hb_003847_140--Hb_011924_030 Hb_003847_140--Hb_029866_140 Hb_001376_020 Hb_001376_020 Hb_029866_140--Hb_001376_020 Hb_029866_140--Hb_008707_020 Hb_029866_140--Hb_176149_010 Hb_011054_030 Hb_011054_030 Hb_029866_140--Hb_011054_030 Hb_004098_010 Hb_004098_010 Hb_176149_010--Hb_004098_010 Hb_000128_010 Hb_000128_010 Hb_176149_010--Hb_000128_010 Hb_004586_380 Hb_004586_380 Hb_176149_010--Hb_004586_380 Hb_006351_080 Hb_006351_080 Hb_176149_010--Hb_006351_080 Hb_176149_010--Hb_000369_150 Hb_000879_100 Hb_000879_100 Hb_066262_010--Hb_000879_100 Hb_005643_010 Hb_005643_010 Hb_066262_010--Hb_005643_010 Hb_000233_060 Hb_000233_060 Hb_066262_010--Hb_000233_060 Hb_066262_010--Hb_119441_010 Hb_119441_010--Hb_000369_150 Hb_119441_010--Hb_005643_010 Hb_001331_050 Hb_001331_050 Hb_119441_010--Hb_001331_050 Hb_119441_010--Hb_000879_100 Hb_119441_010--Hb_004098_010 Hb_119441_010--Hb_000128_010 Hb_000369_150--Hb_004098_010 Hb_000369_150--Hb_000879_100 Hb_000369_150--Hb_000128_010 Hb_000369_150--Hb_005643_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0258155 80.8168 1.10515 7.02567 0 0.011267
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 8.53323 0.303672

CAGE analysis