Hb_000871_020

Information

Type -
Description -
Location Contig871: 36895-40656
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_002517677.1
description receptor-kinase, putative [Ricinus communis]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000871_020 0.0 - - receptor-kinase, putative [Ricinus communis]
2 Hb_009740_010 0.0504514247 - - receptor-kinase, putative [Ricinus communis]
3 Hb_011924_030 0.075696127 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_023827_010 0.0786961378 - - Cucumber peeling cupredoxin, putative [Ricinus communis]
5 Hb_030593_010 0.085155178 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
6 Hb_001766_090 0.092256963 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
7 Hb_064855_010 0.0945001419 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_000284_060 0.0987489733 desease resistance Gene Name: NB-ARC disease resistance protein (TIR-NBS-LRR class), putative [Medicago truncatula]
9 Hb_000484_050 0.1010640178 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
10 Hb_011909_130 0.1013876048 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
11 Hb_007658_030 0.1018413105 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
12 Hb_000796_100 0.1057723921 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
13 Hb_004940_090 0.1101598008 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
14 Hb_011639_130 0.1113009145 - - mads box protein, putative [Ricinus communis]
15 Hb_004829_050 0.11189412 - - hypothetical protein TRIUR3_09654 [Triticum urartu]
16 Hb_034558_010 0.1138917201 - - -
17 Hb_000016_290 0.1140197386 - - multidrug resistance pump, putative [Ricinus communis]
18 Hb_006353_010 0.1152160071 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
19 Hb_001403_100 0.1154461231 - - hypothetical protein CICLE_v10017457mg, partial [Citrus clementina]
20 Hb_001104_260 0.1156633048 - - hypothetical protein JCGZ_23628 [Jatropha curcas]

Gene co-expression network

sample Hb_000871_020 Hb_000871_020 Hb_009740_010 Hb_009740_010 Hb_000871_020--Hb_009740_010 Hb_011924_030 Hb_011924_030 Hb_000871_020--Hb_011924_030 Hb_023827_010 Hb_023827_010 Hb_000871_020--Hb_023827_010 Hb_030593_010 Hb_030593_010 Hb_000871_020--Hb_030593_010 Hb_001766_090 Hb_001766_090 Hb_000871_020--Hb_001766_090 Hb_064855_010 Hb_064855_010 Hb_000871_020--Hb_064855_010 Hb_009740_010--Hb_023827_010 Hb_009740_010--Hb_030593_010 Hb_009740_010--Hb_001766_090 Hb_007658_030 Hb_007658_030 Hb_009740_010--Hb_007658_030 Hb_000484_050 Hb_000484_050 Hb_009740_010--Hb_000484_050 Hb_000035_360 Hb_000035_360 Hb_011924_030--Hb_000035_360 Hb_000284_060 Hb_000284_060 Hb_011924_030--Hb_000284_060 Hb_003847_140 Hb_003847_140 Hb_011924_030--Hb_003847_140 Hb_000796_100 Hb_000796_100 Hb_011924_030--Hb_000796_100 Hb_011924_030--Hb_009740_010 Hb_023827_010--Hb_030593_010 Hb_023827_010--Hb_001766_090 Hb_023827_010--Hb_007658_030 Hb_023827_010--Hb_000484_050 Hb_011909_130 Hb_011909_130 Hb_023827_010--Hb_011909_130 Hb_030593_010--Hb_001766_090 Hb_030593_010--Hb_007658_030 Hb_030593_010--Hb_000484_050 Hb_030593_010--Hb_011909_130 Hb_034558_010 Hb_034558_010 Hb_001766_090--Hb_034558_010 Hb_001766_090--Hb_007658_030 Hb_128894_010 Hb_128894_010 Hb_001766_090--Hb_128894_010 Hb_001766_090--Hb_000484_050 Hb_000844_020 Hb_000844_020 Hb_064855_010--Hb_000844_020 Hb_066262_020 Hb_066262_020 Hb_064855_010--Hb_066262_020 Hb_064855_010--Hb_000796_100 Hb_001271_040 Hb_001271_040 Hb_064855_010--Hb_001271_040 Hb_064855_010--Hb_023827_010 Hb_001403_100 Hb_001403_100 Hb_064855_010--Hb_001403_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0627239 44.2444 0.0135354 0.404446 0.0411171 0.112541
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.0978 0.361151

CAGE analysis