Hb_001168_100

Information

Type -
Description -
Location Contig1168: 94895-97728
Sequence    

Annotation

kegg
ID cit:102626750
description LRR receptor-like serine/threonine-protein kinase FLS2-like
nr
ID XP_006469480.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
swissprot
ID Q9LP24
description Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1
trembl
ID V4UA41
description Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100140161mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001168_100 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
2 Hb_000347_370 0.0730742565 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
3 Hb_004267_070 0.0778158023 - - latex allene oxide synthase [Hevea brasiliensis]
4 Hb_007383_050 0.0792913513 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
5 Hb_089140_020 0.0864139939 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
6 Hb_001411_150 0.0971260802 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
7 Hb_002475_110 0.1126408201 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
8 Hb_025477_020 0.1134319085 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
9 Hb_007305_040 0.1159812505 - - Nodulin-26, putative [Ricinus communis]
10 Hb_027214_060 0.1177252554 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
11 Hb_133646_010 0.1203298289 - - hypothetical protein RCOM_1044030 [Ricinus communis]
12 Hb_010417_120 0.1219991235 - - conserved hypothetical protein [Ricinus communis]
13 Hb_027913_010 0.1227431701 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_000210_150 0.123669746 - - PREDICTED: protein YLS9-like [Jatropha curcas]
15 Hb_001437_200 0.1246838384 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
16 Hb_004531_010 0.1266381621 - - PREDICTED: ankyrin repeat-containing protein At2g01680-like [Jatropha curcas]
17 Hb_002922_010 0.1297593625 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
18 Hb_000227_410 0.1306393223 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
19 Hb_011805_060 0.1325872671 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
20 Hb_189242_010 0.1376293352 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]

Gene co-expression network

sample Hb_001168_100 Hb_001168_100 Hb_000347_370 Hb_000347_370 Hb_001168_100--Hb_000347_370 Hb_004267_070 Hb_004267_070 Hb_001168_100--Hb_004267_070 Hb_007383_050 Hb_007383_050 Hb_001168_100--Hb_007383_050 Hb_089140_020 Hb_089140_020 Hb_001168_100--Hb_089140_020 Hb_001411_150 Hb_001411_150 Hb_001168_100--Hb_001411_150 Hb_002475_110 Hb_002475_110 Hb_001168_100--Hb_002475_110 Hb_000347_370--Hb_004267_070 Hb_000347_370--Hb_007383_050 Hb_011928_030 Hb_011928_030 Hb_000347_370--Hb_011928_030 Hb_007305_040 Hb_007305_040 Hb_000347_370--Hb_007305_040 Hb_133646_010 Hb_133646_010 Hb_000347_370--Hb_133646_010 Hb_004267_070--Hb_007383_050 Hb_004267_070--Hb_001411_150 Hb_000210_150 Hb_000210_150 Hb_004267_070--Hb_000210_150 Hb_004267_070--Hb_089140_020 Hb_007383_050--Hb_001411_150 Hb_009189_010 Hb_009189_010 Hb_007383_050--Hb_009189_010 Hb_007383_050--Hb_089140_020 Hb_189242_010 Hb_189242_010 Hb_089140_020--Hb_189242_010 Hb_055706_010 Hb_055706_010 Hb_089140_020--Hb_055706_010 Hb_089140_020--Hb_001411_150 Hb_001411_150--Hb_009189_010 Hb_001289_030 Hb_001289_030 Hb_001411_150--Hb_001289_030 Hb_013726_100 Hb_013726_100 Hb_002475_110--Hb_013726_100 Hb_027214_060 Hb_027214_060 Hb_002475_110--Hb_027214_060 Hb_000227_410 Hb_000227_410 Hb_002475_110--Hb_000227_410 Hb_025477_030 Hb_025477_030 Hb_002475_110--Hb_025477_030 Hb_001623_020 Hb_001623_020 Hb_002475_110--Hb_001623_020 Hb_000904_090 Hb_000904_090 Hb_002475_110--Hb_000904_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 14.8604 1.05065 2.71081 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.760467 0.123308

CAGE analysis