Hb_027214_060

Information

Type -
Description -
Location Contig27214: 67892-69811
Sequence    

Annotation

kegg
ID tcc:TCM_022020
description Exocyst subunit exo70 family protein H4
nr
ID XP_012074854.1
description PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067KH55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09009 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28478: 68335-68716
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027214_060 0.0 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
2 Hb_000227_410 0.0608251759 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
3 Hb_002475_110 0.0671588834 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
4 Hb_073870_020 0.0765793506 - - PREDICTED: probable receptor-like protein kinase At1g67000, partial [Jatropha curcas]
5 Hb_147137_020 0.0880110007 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
6 Hb_000904_090 0.0893278966 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
7 Hb_000347_360 0.0899367113 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
8 Hb_031862_150 0.0945701732 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
9 Hb_013726_100 0.0964983887 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
10 Hb_010417_120 0.0981662981 - - conserved hypothetical protein [Ricinus communis]
11 Hb_025477_020 0.1006804352 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
12 Hb_025477_030 0.1059613901 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
13 Hb_048538_010 0.1071175919 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Prunus mume]
14 Hb_000210_150 0.1093771343 - - PREDICTED: protein YLS9-like [Jatropha curcas]
15 Hb_104855_020 0.1130913851 - - ankyrin repeat-containing protein, putative [Ricinus communis]
16 Hb_002572_060 0.113512454 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001623_020 0.1162245933 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
18 Hb_009683_060 0.1164160425 - - -
19 Hb_001168_100 0.1177252554 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
20 Hb_189242_010 0.1180028483 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]

Gene co-expression network

sample Hb_027214_060 Hb_027214_060 Hb_000227_410 Hb_000227_410 Hb_027214_060--Hb_000227_410 Hb_002475_110 Hb_002475_110 Hb_027214_060--Hb_002475_110 Hb_073870_020 Hb_073870_020 Hb_027214_060--Hb_073870_020 Hb_147137_020 Hb_147137_020 Hb_027214_060--Hb_147137_020 Hb_000904_090 Hb_000904_090 Hb_027214_060--Hb_000904_090 Hb_000347_360 Hb_000347_360 Hb_027214_060--Hb_000347_360 Hb_000227_410--Hb_000904_090 Hb_000227_410--Hb_002475_110 Hb_000227_410--Hb_000347_360 Hb_031862_150 Hb_031862_150 Hb_000227_410--Hb_031862_150 Hb_048538_010 Hb_048538_010 Hb_000227_410--Hb_048538_010 Hb_013726_100 Hb_013726_100 Hb_002475_110--Hb_013726_100 Hb_025477_030 Hb_025477_030 Hb_002475_110--Hb_025477_030 Hb_001623_020 Hb_001623_020 Hb_002475_110--Hb_001623_020 Hb_002475_110--Hb_000904_090 Hb_073870_020--Hb_000347_360 Hb_002849_030 Hb_002849_030 Hb_073870_020--Hb_002849_030 Hb_009189_010 Hb_009189_010 Hb_073870_020--Hb_009189_010 Hb_073870_020--Hb_000227_410 Hb_073870_020--Hb_048538_010 Hb_008579_010 Hb_008579_010 Hb_147137_020--Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_147137_020--Hb_002486_030 Hb_142691_010 Hb_142691_010 Hb_147137_020--Hb_142691_010 Hb_073423_010 Hb_073423_010 Hb_147137_020--Hb_073423_010 Hb_104855_020 Hb_104855_020 Hb_147137_020--Hb_104855_020 Hb_147137_020--Hb_031862_150 Hb_009683_060 Hb_009683_060 Hb_000904_090--Hb_009683_060 Hb_000904_090--Hb_104855_020 Hb_000904_090--Hb_048538_010 Hb_167802_010 Hb_167802_010 Hb_000904_090--Hb_167802_010 Hb_000347_360--Hb_048538_010 Hb_000347_360--Hb_002849_030 Hb_000322_020 Hb_000322_020 Hb_000347_360--Hb_000322_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 39.0416 3.50748 5.32674 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.118081 0.11149 0.035197 0.384569 0.549101

CAGE analysis