Hb_009189_010

Information

Type transcription factor
Description TF Family: WRKY
Location Contig9189: 12198-14602
Sequence    

Annotation

kegg
ID rcu:RCOM_0849600
description transcription factor, putative
nr
ID XP_012089749.1
description PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
swissprot
ID Q8S8P5
description Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2
trembl
ID M9TNQ5
description Uncharacterized protein OS=Jatropha curcas GN=WRKY08 PE=4 SV=1
Gene Ontology
ID GO:0003700
description probable wrky transcription factor 33

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62314: 12758-14726
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009189_010 0.0 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
2 Hb_001411_150 0.0766895106 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
3 Hb_073870_020 0.0778455932 - - PREDICTED: probable receptor-like protein kinase At1g67000, partial [Jatropha curcas]
4 Hb_007383_050 0.0824805869 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
5 Hb_002849_030 0.0876324818 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
6 Hb_000347_360 0.0904571084 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
7 Hb_001289_030 0.093492324 - - syntaxin, plant, putative [Ricinus communis]
8 Hb_007328_010 0.0978861989 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
9 Hb_001511_270 0.1110524873 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
10 Hb_001477_080 0.1125751574 - - hypothetical protein POPTR_0017s04860g [Populus trichocarpa]
11 Hb_141990_050 0.1126916791 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
12 Hb_009247_020 0.1191650858 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
13 Hb_025477_020 0.1196686886 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
14 Hb_027214_060 0.122614914 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
15 Hb_000210_150 0.123463218 - - PREDICTED: protein YLS9-like [Jatropha curcas]
16 Hb_000322_020 0.1248514775 - - PREDICTED: uncharacterized protein LOC105637914 [Jatropha curcas]
17 Hb_010417_120 0.1262325371 - - conserved hypothetical protein [Ricinus communis]
18 Hb_009476_010 0.1307438309 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
19 Hb_000247_150 0.1317389289 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Jatropha curcas]
20 Hb_048538_010 0.1318060365 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Prunus mume]

Gene co-expression network

sample Hb_009189_010 Hb_009189_010 Hb_001411_150 Hb_001411_150 Hb_009189_010--Hb_001411_150 Hb_073870_020 Hb_073870_020 Hb_009189_010--Hb_073870_020 Hb_007383_050 Hb_007383_050 Hb_009189_010--Hb_007383_050 Hb_002849_030 Hb_002849_030 Hb_009189_010--Hb_002849_030 Hb_000347_360 Hb_000347_360 Hb_009189_010--Hb_000347_360 Hb_001289_030 Hb_001289_030 Hb_009189_010--Hb_001289_030 Hb_001411_150--Hb_007383_050 Hb_001411_150--Hb_001289_030 Hb_004267_070 Hb_004267_070 Hb_001411_150--Hb_004267_070 Hb_001168_100 Hb_001168_100 Hb_001411_150--Hb_001168_100 Hb_089140_020 Hb_089140_020 Hb_001411_150--Hb_089140_020 Hb_073870_020--Hb_000347_360 Hb_073870_020--Hb_002849_030 Hb_027214_060 Hb_027214_060 Hb_073870_020--Hb_027214_060 Hb_000227_410 Hb_000227_410 Hb_073870_020--Hb_000227_410 Hb_048538_010 Hb_048538_010 Hb_073870_020--Hb_048538_010 Hb_007383_050--Hb_001168_100 Hb_007383_050--Hb_004267_070 Hb_000347_370 Hb_000347_370 Hb_007383_050--Hb_000347_370 Hb_007383_050--Hb_089140_020 Hb_002849_030--Hb_000347_360 Hb_000322_020 Hb_000322_020 Hb_002849_030--Hb_000322_020 Hb_000422_050 Hb_000422_050 Hb_002849_030--Hb_000422_050 Hb_002849_030--Hb_048538_010 Hb_000347_360--Hb_048538_010 Hb_000347_360--Hb_000227_410 Hb_000347_360--Hb_000322_020 Hb_000347_360--Hb_027214_060 Hb_009683_010 Hb_009683_010 Hb_001289_030--Hb_009683_010 Hb_003582_020 Hb_003582_020 Hb_001289_030--Hb_003582_020 Hb_025477_020 Hb_025477_020 Hb_001289_030--Hb_025477_020 Hb_001289_030--Hb_007383_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.013368 75.4145 11.9414 11.2996 0 0.00943254
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.244978 0.1542 0.0364758 3.19243 3.73915

CAGE analysis