Hb_009683_010

Information

Type -
Description -
Location Contig9683: 3492-11119
Sequence    

Annotation

kegg
ID pmum:103338769
description probable receptor-like protein kinase At1g67000
nr
ID XP_012075453.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID D7SJ27
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03330 PE=3 SV=1
Gene Ontology
ID GO:0005488
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009683_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_001289_030 0.0713190095 - - syntaxin, plant, putative [Ricinus communis]
3 Hb_012545_080 0.1057904702 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
4 Hb_007407_010 0.1067877802 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 74 [Populus euphratica]
5 Hb_001568_120 0.1140497053 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
6 Hb_003582_020 0.1164939199 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
7 Hb_001411_150 0.1217295195 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
8 Hb_000571_030 0.125269447 - - ammonium transporter, putative [Ricinus communis]
9 Hb_006698_020 0.1255203039 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
10 Hb_002205_260 0.125662276 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
11 Hb_007383_050 0.1262425044 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
12 Hb_000133_060 0.1266299989 - - PREDICTED: protein YLS9-like [Jatropha curcas]
13 Hb_000656_350 0.1278158504 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
14 Hb_019654_010 0.1278915308 - - multicopper oxidase, putative [Ricinus communis]
15 Hb_002922_010 0.1348958872 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
16 Hb_005605_030 0.1352925635 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
17 Hb_009189_010 0.135486606 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
18 Hb_001477_080 0.1417962817 - - hypothetical protein POPTR_0017s04860g [Populus trichocarpa]
19 Hb_005357_270 0.1423660712 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
20 Hb_018043_010 0.143484772 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]

Gene co-expression network

sample Hb_009683_010 Hb_009683_010 Hb_001289_030 Hb_001289_030 Hb_009683_010--Hb_001289_030 Hb_012545_080 Hb_012545_080 Hb_009683_010--Hb_012545_080 Hb_007407_010 Hb_007407_010 Hb_009683_010--Hb_007407_010 Hb_001568_120 Hb_001568_120 Hb_009683_010--Hb_001568_120 Hb_003582_020 Hb_003582_020 Hb_009683_010--Hb_003582_020 Hb_001411_150 Hb_001411_150 Hb_009683_010--Hb_001411_150 Hb_001289_030--Hb_001411_150 Hb_001289_030--Hb_003582_020 Hb_009189_010 Hb_009189_010 Hb_001289_030--Hb_009189_010 Hb_025477_020 Hb_025477_020 Hb_001289_030--Hb_025477_020 Hb_007383_050 Hb_007383_050 Hb_001289_030--Hb_007383_050 Hb_000996_200 Hb_000996_200 Hb_012545_080--Hb_000996_200 Hb_005357_270 Hb_005357_270 Hb_012545_080--Hb_005357_270 Hb_000110_330 Hb_000110_330 Hb_012545_080--Hb_000110_330 Hb_012545_080--Hb_007407_010 Hb_012404_050 Hb_012404_050 Hb_012545_080--Hb_012404_050 Hb_000133_060 Hb_000133_060 Hb_007407_010--Hb_000133_060 Hb_005605_030 Hb_005605_030 Hb_007407_010--Hb_005605_030 Hb_007407_010--Hb_000110_330 Hb_002205_260 Hb_002205_260 Hb_007407_010--Hb_002205_260 Hb_000000_070 Hb_000000_070 Hb_001568_120--Hb_000000_070 Hb_117127_010 Hb_117127_010 Hb_001568_120--Hb_117127_010 Hb_006698_020 Hb_006698_020 Hb_001568_120--Hb_006698_020 Hb_029866_050 Hb_029866_050 Hb_001568_120--Hb_029866_050 Hb_041145_010 Hb_041145_010 Hb_001568_120--Hb_041145_010 Hb_003582_020--Hb_025477_020 Hb_002922_010 Hb_002922_010 Hb_003582_020--Hb_002922_010 Hb_035391_010 Hb_035391_010 Hb_003582_020--Hb_035391_010 Hb_136027_010 Hb_136027_010 Hb_003582_020--Hb_136027_010 Hb_003582_020--Hb_001411_150 Hb_001411_150--Hb_007383_050 Hb_001411_150--Hb_009189_010 Hb_004267_070 Hb_004267_070 Hb_001411_150--Hb_004267_070 Hb_001168_100 Hb_001168_100 Hb_001411_150--Hb_001168_100 Hb_089140_020 Hb_089140_020 Hb_001411_150--Hb_089140_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.66189 1.09426 0.844651 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.297985 0.0771376

CAGE analysis