Hb_000996_200

Information

Type -
Description -
Location Contig996: 219771-222130
Sequence    

Annotation

kegg
ID pop:POPTR_1018s00210g
description hypothetical protein
nr
ID XP_011028503.1
description PREDICTED: (+)-neomenthol dehydrogenase-like [Populus euphratica]
swissprot
ID A4UHT7
description Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1
trembl
ID U7DW11
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_1018s00210g PE=3 SV=1
Gene Ontology
ID GO:0016491
description salutaridine reductase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64839: 221379-222018
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000996_200 0.0 - - PREDICTED: (+)-neomenthol dehydrogenase-like [Populus euphratica]
2 Hb_012545_080 0.0726093373 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
3 Hb_005357_270 0.0901329706 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
4 Hb_006634_080 0.0933481717 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
5 Hb_157980_010 0.1018415532 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
6 Hb_004459_110 0.1159385087 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
7 Hb_004785_120 0.1188052129 - - Receptor protein kinase 1 [Theobroma cacao]
8 Hb_174380_010 0.1198687319 - - kinase, putative [Ricinus communis]
9 Hb_000110_330 0.1214399795 - - PREDICTED: probable nitrite transporter At1g68570-like [Glycine max]
10 Hb_055147_010 0.1269728591 - - thioredoxin H-type 7 [Hevea brasiliensis]
11 Hb_002085_070 0.1281575728 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
12 Hb_001021_110 0.129710307 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
13 Hb_012404_050 0.1375690065 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
14 Hb_009083_010 0.1422519535 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
15 Hb_007433_020 0.14496592 - - hypothetical protein VITISV_005320 [Vitis vinifera]
16 Hb_000133_060 0.147414028 - - PREDICTED: protein YLS9-like [Jatropha curcas]
17 Hb_000075_110 0.1485803979 - - aldo-keto reductase, putative [Ricinus communis]
18 Hb_008667_030 0.148751464 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
19 Hb_012018_020 0.1518269604 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Eucalyptus grandis]
20 Hb_000002_100 0.1534069689 - - phosphate transporter [Manihot esculenta]

Gene co-expression network

sample Hb_000996_200 Hb_000996_200 Hb_012545_080 Hb_012545_080 Hb_000996_200--Hb_012545_080 Hb_005357_270 Hb_005357_270 Hb_000996_200--Hb_005357_270 Hb_006634_080 Hb_006634_080 Hb_000996_200--Hb_006634_080 Hb_157980_010 Hb_157980_010 Hb_000996_200--Hb_157980_010 Hb_004459_110 Hb_004459_110 Hb_000996_200--Hb_004459_110 Hb_004785_120 Hb_004785_120 Hb_000996_200--Hb_004785_120 Hb_012545_080--Hb_005357_270 Hb_000110_330 Hb_000110_330 Hb_012545_080--Hb_000110_330 Hb_009683_010 Hb_009683_010 Hb_012545_080--Hb_009683_010 Hb_007407_010 Hb_007407_010 Hb_012545_080--Hb_007407_010 Hb_012404_050 Hb_012404_050 Hb_012545_080--Hb_012404_050 Hb_005357_270--Hb_000110_330 Hb_005357_270--Hb_006634_080 Hb_009083_010 Hb_009083_010 Hb_005357_270--Hb_009083_010 Hb_174380_010 Hb_174380_010 Hb_005357_270--Hb_174380_010 Hb_006634_080--Hb_157980_010 Hb_006634_080--Hb_009083_010 Hb_006634_080--Hb_174380_010 Hb_006634_080--Hb_000110_330 Hb_002085_070 Hb_002085_070 Hb_157980_010--Hb_002085_070 Hb_111985_060 Hb_111985_060 Hb_157980_010--Hb_111985_060 Hb_001514_100 Hb_001514_100 Hb_157980_010--Hb_001514_100 Hb_157980_010--Hb_004459_110 Hb_004459_110--Hb_002085_070 Hb_000002_100 Hb_000002_100 Hb_004459_110--Hb_000002_100 Hb_004459_110--Hb_006634_080 Hb_006970_150 Hb_006970_150 Hb_004459_110--Hb_006970_150 Hb_055147_010 Hb_055147_010 Hb_004785_120--Hb_055147_010 Hb_001021_110 Hb_001021_110 Hb_004785_120--Hb_001021_110 Hb_004785_120--Hb_012404_050 Hb_004785_120--Hb_012545_080 Hb_004785_120--Hb_000110_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.83087 2.43283 0.934818 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.041726 0 1.84748 0.170262

CAGE analysis