Hb_157980_010

Information

Type -
Description -
Location Contig157980: 4-768
Sequence    

Annotation

kegg
ID cit:102628061
description UDP-glucose flavonoid 3-O-glucosyltransferase 6-like
nr
ID AFD61601.1
description anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
swissprot
ID Q40285
description Anthocyanidin 3-O-glucosyltransferase 2 (Fragment) OS=Manihot esculenta GN=GT2 PE=2 SV=1
trembl
ID H9BMN5
description Anthocyanidin 3-O-glucosyltransferase OS=Hevea brasiliensis GN=ANGT1 PE=2 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_157980_010 0.0 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
2 Hb_002085_070 0.0840716569 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
3 Hb_000996_200 0.1018415532 - - PREDICTED: (+)-neomenthol dehydrogenase-like [Populus euphratica]
4 Hb_006634_080 0.1021761828 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
5 Hb_111985_060 0.1207279696 - - PREDICTED: cytokinin dehydrogenase 5 [Jatropha curcas]
6 Hb_001514_100 0.1280250503 - - PREDICTED: F-box protein GID2 [Jatropha curcas]
7 Hb_004459_110 0.128162538 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
8 Hb_003090_060 0.1306403545 - - PAR1 protein [Theobroma cacao]
9 Hb_012545_080 0.1309222872 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
10 Hb_000002_100 0.1316411974 - - phosphate transporter [Manihot esculenta]
11 Hb_020648_020 0.1318459365 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
12 Hb_000075_110 0.1361120962 - - aldo-keto reductase, putative [Ricinus communis]
13 Hb_021596_070 0.1365297355 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
14 Hb_165404_010 0.1374277156 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
15 Hb_174380_010 0.1380783978 - - kinase, putative [Ricinus communis]
16 Hb_002621_030 0.1391579426 - - hypothetical protein CISIN_1g006155mg [Citrus sinensis]
17 Hb_000338_030 0.1391993523 transcription factor TF Family: HB hypothetical protein JCGZ_21254 [Jatropha curcas]
18 Hb_005357_270 0.1395982118 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
19 Hb_000521_290 0.1396604954 - - hypothetical protein POPTR_0001s23530g [Populus trichocarpa]
20 Hb_002410_010 0.1396607023 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]

Gene co-expression network

sample Hb_157980_010 Hb_157980_010 Hb_002085_070 Hb_002085_070 Hb_157980_010--Hb_002085_070 Hb_000996_200 Hb_000996_200 Hb_157980_010--Hb_000996_200 Hb_006634_080 Hb_006634_080 Hb_157980_010--Hb_006634_080 Hb_111985_060 Hb_111985_060 Hb_157980_010--Hb_111985_060 Hb_001514_100 Hb_001514_100 Hb_157980_010--Hb_001514_100 Hb_004459_110 Hb_004459_110 Hb_157980_010--Hb_004459_110 Hb_002085_070--Hb_001514_100 Hb_000521_290 Hb_000521_290 Hb_002085_070--Hb_000521_290 Hb_000002_100 Hb_000002_100 Hb_002085_070--Hb_000002_100 Hb_012018_020 Hb_012018_020 Hb_002085_070--Hb_012018_020 Hb_000265_020 Hb_000265_020 Hb_002085_070--Hb_000265_020 Hb_012545_080 Hb_012545_080 Hb_000996_200--Hb_012545_080 Hb_005357_270 Hb_005357_270 Hb_000996_200--Hb_005357_270 Hb_000996_200--Hb_006634_080 Hb_000996_200--Hb_004459_110 Hb_004785_120 Hb_004785_120 Hb_000996_200--Hb_004785_120 Hb_009083_010 Hb_009083_010 Hb_006634_080--Hb_009083_010 Hb_174380_010 Hb_174380_010 Hb_006634_080--Hb_174380_010 Hb_006634_080--Hb_005357_270 Hb_000110_330 Hb_000110_330 Hb_006634_080--Hb_000110_330 Hb_003090_060 Hb_003090_060 Hb_111985_060--Hb_003090_060 Hb_005054_300 Hb_005054_300 Hb_111985_060--Hb_005054_300 Hb_011054_030 Hb_011054_030 Hb_111985_060--Hb_011054_030 Hb_021596_070 Hb_021596_070 Hb_111985_060--Hb_021596_070 Hb_002621_030 Hb_002621_030 Hb_111985_060--Hb_002621_030 Hb_008667_020 Hb_008667_020 Hb_111985_060--Hb_008667_020 Hb_002294_010 Hb_002294_010 Hb_001514_100--Hb_002294_010 Hb_001514_100--Hb_012018_020 Hb_001514_100--Hb_000002_100 Hb_001514_100--Hb_000521_290 Hb_004230_060 Hb_004230_060 Hb_001514_100--Hb_004230_060 Hb_004459_110--Hb_002085_070 Hb_004459_110--Hb_000002_100 Hb_004459_110--Hb_006634_080 Hb_006970_150 Hb_006970_150 Hb_004459_110--Hb_006970_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.75814 0.70691 0.365981 0 0.0385863
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.867822 0.112555

CAGE analysis