Hb_002294_010

Information

Type -
Description -
Location Contig2294: 945-3279
Sequence    

Annotation

kegg
ID pop:POPTR_0003s18490g
description POPTRDRAFT_854085; putative wall-associated kinase family protein
nr
ID XP_012067451.1
description PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
swissprot
ID Q9SA25
description Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1
trembl
ID A0A067LBR0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26948 PE=4 SV=1
Gene Ontology
ID GO:0016772
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002294_010 0.0 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
2 Hb_000070_140 0.0834859417 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
3 Hb_001514_100 0.0973154132 - - PREDICTED: F-box protein GID2 [Jatropha curcas]
4 Hb_000417_030 0.1325169779 transcription factor TF Family: G2-like PREDICTED: putative two-component response regulator ARR19 [Jatropha curcas]
5 Hb_118777_010 0.1329441858 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
6 Hb_001363_030 0.1347611645 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Populus euphratica]
7 Hb_000003_620 0.136453015 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
8 Hb_003636_010 0.1366332945 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
9 Hb_005054_300 0.1401343266 - - aquaporin [Hevea brasiliensis]
10 Hb_007371_020 0.1507733601 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
11 Hb_002085_070 0.1533543348 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
12 Hb_005588_020 0.1560578506 - - PREDICTED: patatin-like protein 2 [Vitis vinifera]
13 Hb_152718_010 0.1570294001 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
14 Hb_004230_060 0.1571428321 - - PREDICTED: ferritin, chloroplastic-like [Populus euphratica]
15 Hb_000512_080 0.1627465937 - - ankyrin repeat-containing protein, putative [Ricinus communis]
16 Hb_025030_010 0.163509782 - - -
17 Hb_000521_290 0.1640336678 - - hypothetical protein POPTR_0001s23530g [Populus trichocarpa]
18 Hb_012553_010 0.1656813143 - - hypothetical protein JCGZ_10552 [Jatropha curcas]
19 Hb_010962_030 0.1662262605 - - kinase, putative [Ricinus communis]
20 Hb_000002_100 0.1672193415 - - phosphate transporter [Manihot esculenta]

Gene co-expression network

sample Hb_002294_010 Hb_002294_010 Hb_000070_140 Hb_000070_140 Hb_002294_010--Hb_000070_140 Hb_001514_100 Hb_001514_100 Hb_002294_010--Hb_001514_100 Hb_000417_030 Hb_000417_030 Hb_002294_010--Hb_000417_030 Hb_118777_010 Hb_118777_010 Hb_002294_010--Hb_118777_010 Hb_001363_030 Hb_001363_030 Hb_002294_010--Hb_001363_030 Hb_000003_620 Hb_000003_620 Hb_002294_010--Hb_000003_620 Hb_003636_010 Hb_003636_010 Hb_000070_140--Hb_003636_010 Hb_012268_010 Hb_012268_010 Hb_000070_140--Hb_012268_010 Hb_000070_140--Hb_118777_010 Hb_012553_010 Hb_012553_010 Hb_000070_140--Hb_012553_010 Hb_005588_020 Hb_005588_020 Hb_000070_140--Hb_005588_020 Hb_002085_070 Hb_002085_070 Hb_001514_100--Hb_002085_070 Hb_012018_020 Hb_012018_020 Hb_001514_100--Hb_012018_020 Hb_000002_100 Hb_000002_100 Hb_001514_100--Hb_000002_100 Hb_000521_290 Hb_000521_290 Hb_001514_100--Hb_000521_290 Hb_004230_060 Hb_004230_060 Hb_001514_100--Hb_004230_060 Hb_000417_030--Hb_001514_100 Hb_000417_030--Hb_012018_020 Hb_000417_030--Hb_004230_060 Hb_000417_030--Hb_000002_100 Hb_010962_030 Hb_010962_030 Hb_000417_030--Hb_010962_030 Hb_118777_010--Hb_003636_010 Hb_003117_060 Hb_003117_060 Hb_118777_010--Hb_003117_060 Hb_152718_010 Hb_152718_010 Hb_118777_010--Hb_152718_010 Hb_118777_010--Hb_001363_030 Hb_106969_010 Hb_106969_010 Hb_118777_010--Hb_106969_010 Hb_001365_040 Hb_001365_040 Hb_001363_030--Hb_001365_040 Hb_001363_030--Hb_000003_620 Hb_009778_030 Hb_009778_030 Hb_001363_030--Hb_009778_030 Hb_004970_130 Hb_004970_130 Hb_001363_030--Hb_004970_130 Hb_000111_130 Hb_000111_130 Hb_001363_030--Hb_000111_130 Hb_000146_110 Hb_000146_110 Hb_000003_620--Hb_000146_110 Hb_000003_620--Hb_009778_030 Hb_000003_620--Hb_000111_130 Hb_007371_020 Hb_007371_020 Hb_000003_620--Hb_007371_020 Hb_000003_620--Hb_001365_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.05563 0.129684 0.0143305 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.310037 0.0694089

CAGE analysis