Hb_055147_010

Information

Type -
Description -
Location Contig55147: 477-1070
Sequence    

Annotation

kegg
ID rcu:RCOM_1595970
description Thioredoxin H-type, putative
nr
ID AEC03322.1
description thioredoxin H-type 7 [Hevea brasiliensis]
swissprot
ID Q43636
description Thioredoxin H-type OS=Ricinus communis PE=3 SV=1
trembl
ID I1SSJ3
description Thioredoxin H-type 7 OS=Hevea brasiliensis GN=TrxH7 PE=2 SV=1
Gene Ontology
ID GO:0005829
description thioredoxin h-type

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_055147_010 0.0 - - thioredoxin H-type 7 [Hevea brasiliensis]
2 Hb_004785_120 0.0805050105 - - Receptor protein kinase 1 [Theobroma cacao]
3 Hb_012404_050 0.0972527091 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
4 Hb_000720_110 0.1245455648 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
5 Hb_000996_200 0.1269728591 - - PREDICTED: (+)-neomenthol dehydrogenase-like [Populus euphratica]
6 Hb_000110_330 0.1289661167 - - PREDICTED: probable nitrite transporter At1g68570-like [Glycine max]
7 Hb_000862_060 0.1302978905 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005306_040 0.1375527676 - - calmodulin binding protein, putative [Ricinus communis]
9 Hb_012545_080 0.1468871849 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
10 Hb_002615_010 0.1493565282 - - Uncharacterized protein TCM_040942 [Theobroma cacao]
11 Hb_002374_360 0.1521405301 - - hypothetical protein POPTR_0002s08300g [Populus trichocarpa]
12 Hb_005357_270 0.1582416105 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
13 Hb_001021_110 0.1583722326 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
14 Hb_006634_080 0.1624143602 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
15 Hb_043522_010 0.167892365 - - -
16 Hb_001481_030 0.169528902 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000598_020 0.1710001451 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
18 Hb_000075_110 0.1722383203 - - aldo-keto reductase, putative [Ricinus communis]
19 Hb_165404_010 0.1744789032 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
20 Hb_157980_010 0.1772059747 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]

Gene co-expression network

sample Hb_055147_010 Hb_055147_010 Hb_004785_120 Hb_004785_120 Hb_055147_010--Hb_004785_120 Hb_012404_050 Hb_012404_050 Hb_055147_010--Hb_012404_050 Hb_000720_110 Hb_000720_110 Hb_055147_010--Hb_000720_110 Hb_000996_200 Hb_000996_200 Hb_055147_010--Hb_000996_200 Hb_000110_330 Hb_000110_330 Hb_055147_010--Hb_000110_330 Hb_000862_060 Hb_000862_060 Hb_055147_010--Hb_000862_060 Hb_001021_110 Hb_001021_110 Hb_004785_120--Hb_001021_110 Hb_004785_120--Hb_000996_200 Hb_004785_120--Hb_012404_050 Hb_012545_080 Hb_012545_080 Hb_004785_120--Hb_012545_080 Hb_004785_120--Hb_000110_330 Hb_012404_050--Hb_000110_330 Hb_012404_050--Hb_012545_080 Hb_133845_010 Hb_133845_010 Hb_012404_050--Hb_133845_010 Hb_007407_010 Hb_007407_010 Hb_012404_050--Hb_007407_010 Hb_001481_030 Hb_001481_030 Hb_000720_110--Hb_001481_030 Hb_005306_040 Hb_005306_040 Hb_000720_110--Hb_005306_040 Hb_000692_180 Hb_000692_180 Hb_000720_110--Hb_000692_180 Hb_165404_010 Hb_165404_010 Hb_000720_110--Hb_165404_010 Hb_000075_110 Hb_000075_110 Hb_000720_110--Hb_000075_110 Hb_000996_200--Hb_012545_080 Hb_005357_270 Hb_005357_270 Hb_000996_200--Hb_005357_270 Hb_006634_080 Hb_006634_080 Hb_000996_200--Hb_006634_080 Hb_157980_010 Hb_157980_010 Hb_000996_200--Hb_157980_010 Hb_004459_110 Hb_004459_110 Hb_000996_200--Hb_004459_110 Hb_041145_010 Hb_041145_010 Hb_000110_330--Hb_041145_010 Hb_000110_330--Hb_012545_080 Hb_000110_330--Hb_007407_010 Hb_000110_330--Hb_005357_270 Hb_000133_060 Hb_000133_060 Hb_000110_330--Hb_000133_060 Hb_002374_360 Hb_002374_360 Hb_000862_060--Hb_002374_360 Hb_002157_100 Hb_002157_100 Hb_000862_060--Hb_002157_100 Hb_003751_050 Hb_003751_050 Hb_000862_060--Hb_003751_050 Hb_008080_030 Hb_008080_030 Hb_000862_060--Hb_008080_030 Hb_043522_010 Hb_043522_010 Hb_000862_060--Hb_043522_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.247889 0.138747 0.0432349 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0991658 0

CAGE analysis