Hb_147137_020

Information

Type -
Description -
Location Contig147137: 2180-2767
Sequence    

Annotation

kegg
ID pop:POPTR_0018s05900g
description POPTRDRAFT_578448; hypothetical protein
nr
ID KDP33656.1
description hypothetical protein JCGZ_07227 [Jatropha curcas]
swissprot
ID O82337
description Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1
trembl
ID A0A067KBQ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07227 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_147137_020 0.0 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
2 Hb_008579_010 0.0610007439 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
3 Hb_002486_030 0.0624899457 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
4 Hb_142691_010 0.0626691785 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
5 Hb_073423_010 0.0660639757 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_104855_020 0.067722271 - - ankyrin repeat-containing protein, putative [Ricinus communis]
7 Hb_031862_150 0.0688093087 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
8 Hb_012691_040 0.0720939763 - - PREDICTED: cytochrome P450 81E8-like [Fragaria vesca subsp. vesca]
9 Hb_143232_020 0.0750956992 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
10 Hb_000227_410 0.0787001839 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
11 Hb_000904_090 0.0804858633 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
12 Hb_001565_050 0.0825454253 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
13 Hb_004117_360 0.0829534838 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
14 Hb_000086_600 0.0836132723 - - -
15 Hb_001514_110 0.0861393235 - - conserved hypothetical protein [Ricinus communis]
16 Hb_027214_060 0.0880110007 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
17 Hb_117602_010 0.0931616518 - - dimethylaniline monooxygenase, putative [Ricinus communis]
18 Hb_009683_060 0.0937403603 - - -
19 Hb_189242_010 0.097796099 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]
20 Hb_001623_020 0.0978066902 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_147137_020 Hb_147137_020 Hb_008579_010 Hb_008579_010 Hb_147137_020--Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_147137_020--Hb_002486_030 Hb_142691_010 Hb_142691_010 Hb_147137_020--Hb_142691_010 Hb_073423_010 Hb_073423_010 Hb_147137_020--Hb_073423_010 Hb_104855_020 Hb_104855_020 Hb_147137_020--Hb_104855_020 Hb_031862_150 Hb_031862_150 Hb_147137_020--Hb_031862_150 Hb_008579_010--Hb_002486_030 Hb_008579_010--Hb_142691_010 Hb_008579_010--Hb_073423_010 Hb_012691_040 Hb_012691_040 Hb_008579_010--Hb_012691_040 Hb_143232_020 Hb_143232_020 Hb_008579_010--Hb_143232_020 Hb_008579_010--Hb_104855_020 Hb_002486_030--Hb_073423_010 Hb_002486_030--Hb_142691_010 Hb_002486_030--Hb_012691_040 Hb_002486_030--Hb_143232_020 Hb_002486_030--Hb_104855_020 Hb_142691_010--Hb_012691_040 Hb_142691_010--Hb_073423_010 Hb_001514_110 Hb_001514_110 Hb_142691_010--Hb_001514_110 Hb_142691_010--Hb_104855_020 Hb_073423_010--Hb_012691_040 Hb_073423_010--Hb_143232_020 Hb_004117_360 Hb_004117_360 Hb_073423_010--Hb_004117_360 Hb_009683_060 Hb_009683_060 Hb_104855_020--Hb_009683_060 Hb_104855_020--Hb_143232_020 Hb_001623_020 Hb_001623_020 Hb_104855_020--Hb_001623_020 Hb_048538_010 Hb_048538_010 Hb_031862_150--Hb_048538_010 Hb_022768_010 Hb_022768_010 Hb_031862_150--Hb_022768_010 Hb_000227_410 Hb_000227_410 Hb_031862_150--Hb_000227_410 Hb_000086_600 Hb_000086_600 Hb_031862_150--Hb_000086_600 Hb_031862_150--Hb_142691_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.270316 1880.95 216.476 183.512 0.0704728 0.0630525
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.31495 5.68069 0 2.88276 5.85789

CAGE analysis