Hb_008579_010

Information

Type -
Description -
Location Contig8579: 59-5462
Sequence    

Annotation

kegg
ID fve:101299142
description LRR receptor-like serine/threonine-protein kinase EFR-like
nr
ID KDP44811.1
description hypothetical protein JCGZ_01311 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067L8N8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01311 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008579_010 0.0 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
2 Hb_002486_030 0.0084084673 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
3 Hb_142691_010 0.0127748437 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
4 Hb_073423_010 0.0168750815 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_012691_040 0.0285325937 - - PREDICTED: cytochrome P450 81E8-like [Fragaria vesca subsp. vesca]
6 Hb_143232_020 0.0428083408 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
7 Hb_104855_020 0.0448555611 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_001514_110 0.0491272352 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004117_360 0.0522984822 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
10 Hb_147137_020 0.0610007439 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
11 Hb_001565_050 0.0727221493 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
12 Hb_011111_010 0.0766375025 - - PREDICTED: putative RING-H2 finger protein ATL21A [Jatropha curcas]
13 Hb_005725_180 0.0825330459 - - -
14 Hb_001623_020 0.084152164 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
15 Hb_009683_060 0.0860250282 - - -
16 Hb_111908_010 0.0914865022 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_031862_150 0.0926674033 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
18 Hb_117602_010 0.0933794156 - - dimethylaniline monooxygenase, putative [Ricinus communis]
19 Hb_189242_010 0.0949852827 - - hypothetical protein B456_013G0075002, partial [Gossypium raimondii]
20 Hb_000904_090 0.0986128966 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]

Gene co-expression network

sample Hb_008579_010 Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_008579_010--Hb_002486_030 Hb_142691_010 Hb_142691_010 Hb_008579_010--Hb_142691_010 Hb_073423_010 Hb_073423_010 Hb_008579_010--Hb_073423_010 Hb_012691_040 Hb_012691_040 Hb_008579_010--Hb_012691_040 Hb_143232_020 Hb_143232_020 Hb_008579_010--Hb_143232_020 Hb_104855_020 Hb_104855_020 Hb_008579_010--Hb_104855_020 Hb_002486_030--Hb_073423_010 Hb_002486_030--Hb_142691_010 Hb_002486_030--Hb_012691_040 Hb_002486_030--Hb_143232_020 Hb_002486_030--Hb_104855_020 Hb_142691_010--Hb_012691_040 Hb_142691_010--Hb_073423_010 Hb_001514_110 Hb_001514_110 Hb_142691_010--Hb_001514_110 Hb_142691_010--Hb_104855_020 Hb_073423_010--Hb_012691_040 Hb_073423_010--Hb_143232_020 Hb_004117_360 Hb_004117_360 Hb_073423_010--Hb_004117_360 Hb_012691_040--Hb_001514_110 Hb_012691_040--Hb_004117_360 Hb_011111_010 Hb_011111_010 Hb_143232_020--Hb_011111_010 Hb_143232_020--Hb_104855_020 Hb_001623_020 Hb_001623_020 Hb_143232_020--Hb_001623_020 Hb_009683_060 Hb_009683_060 Hb_104855_020--Hb_009683_060 Hb_104855_020--Hb_001623_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.227992 0.0255371 0.0196356 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis