Hb_167802_010

Information

Type -
Description -
Location Contig167802: 1-3555
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_011020398.1
description PREDICTED: receptor-like protein 12 [Populus euphratica]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0005515
description disease resistance family protein lrr family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167802_010 0.0 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
2 Hb_009683_060 0.0375526356 - - -
3 Hb_001623_020 0.0778477129 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
4 Hb_104855_020 0.0783310124 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_000904_090 0.0799870306 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
6 Hb_025477_030 0.0805262008 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
7 Hb_000338_020 0.082895562 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
8 Hb_114932_010 0.0829090532 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_013726_100 0.0848933379 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
10 Hb_002475_110 0.08754647 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
11 Hb_000134_010 0.0878027284 - - -
12 Hb_000256_050 0.0889324099 - - chitinase, putative [Ricinus communis]
13 Hb_009393_010 0.0953764239 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
14 Hb_009707_010 0.1001414254 - - PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
15 Hb_137612_010 0.101008776 - - cytochrome P450, putative [Ricinus communis]
16 Hb_064692_010 0.1037278125 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_000227_410 0.1109649076 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
18 Hb_041534_010 0.1113497719 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
19 Hb_143232_020 0.1180594247 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
20 Hb_007728_010 0.1187306935 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]

Gene co-expression network

sample Hb_167802_010 Hb_167802_010 Hb_009683_060 Hb_009683_060 Hb_167802_010--Hb_009683_060 Hb_001623_020 Hb_001623_020 Hb_167802_010--Hb_001623_020 Hb_104855_020 Hb_104855_020 Hb_167802_010--Hb_104855_020 Hb_000904_090 Hb_000904_090 Hb_167802_010--Hb_000904_090 Hb_025477_030 Hb_025477_030 Hb_167802_010--Hb_025477_030 Hb_000338_020 Hb_000338_020 Hb_167802_010--Hb_000338_020 Hb_009683_060--Hb_104855_020 Hb_009683_060--Hb_001623_020 Hb_009683_060--Hb_000904_090 Hb_114932_010 Hb_114932_010 Hb_009683_060--Hb_114932_010 Hb_009683_060--Hb_000338_020 Hb_000256_050 Hb_000256_050 Hb_001623_020--Hb_000256_050 Hb_001623_020--Hb_104855_020 Hb_013726_100 Hb_013726_100 Hb_001623_020--Hb_013726_100 Hb_143232_020 Hb_143232_020 Hb_001623_020--Hb_143232_020 Hb_002475_110 Hb_002475_110 Hb_001623_020--Hb_002475_110 Hb_008579_010 Hb_008579_010 Hb_104855_020--Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_104855_020--Hb_002486_030 Hb_104855_020--Hb_143232_020 Hb_142691_010 Hb_142691_010 Hb_104855_020--Hb_142691_010 Hb_000227_410 Hb_000227_410 Hb_000904_090--Hb_000227_410 Hb_000904_090--Hb_104855_020 Hb_048538_010 Hb_048538_010 Hb_000904_090--Hb_048538_010 Hb_000904_090--Hb_002475_110 Hb_009393_010 Hb_009393_010 Hb_025477_030--Hb_009393_010 Hb_025477_030--Hb_002475_110 Hb_025477_030--Hb_013726_100 Hb_000134_010 Hb_000134_010 Hb_025477_030--Hb_000134_010 Hb_025477_030--Hb_000904_090 Hb_000338_020--Hb_114932_010 Hb_064692_010 Hb_064692_010 Hb_000338_020--Hb_064692_010 Hb_009707_010 Hb_009707_010 Hb_000338_020--Hb_009707_010 Hb_125201_010 Hb_125201_010 Hb_000338_020--Hb_125201_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.667212 0.0659982 0.142653 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis