Hb_003835_030

Information

Type -
Description -
Location Contig3835: 27866-48924
Sequence    

Annotation

kegg
ID rcu:RCOM_0410730
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID AHL38585.1
description glycosyltransferase, partial [Arabidopsis thaliana]
swissprot
ID Q43716
description Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1
trembl
ID F6I727
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0218g00150 PE=4 SV=1
Gene Ontology
ID GO:0047213
description udp-glycosyltransferase 91a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38661: 36779-37264 , PASA_asmbl_38662: 46721-47060 , PASA_asmbl_38664: 47783-48052
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003835_030 0.0 - - glycosyltransferase, partial [Arabidopsis thaliana]
2 Hb_008092_020 0.0665084639 - - transcription factor, putative [Ricinus communis]
3 Hb_001013_050 0.0767807617 - - unnamed protein product [Coffea canephora]
4 Hb_002000_130 0.0951091191 - - PREDICTED: abscisic stress-ripening protein 2-like [Eucalyptus grandis]
5 Hb_000589_330 0.0978189253 - - kinase, putative [Ricinus communis]
6 Hb_005034_010 0.0979448739 - - alcohol dehydrogenase, putative [Ricinus communis]
7 Hb_000472_020 0.0998289282 - - PREDICTED: uncharacterized protein LOC105641103 [Jatropha curcas]
8 Hb_002431_090 0.1084051851 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001913_030 0.1084570124 - - ankyrin repeat protein [Bruguiera gymnorhiza]
10 Hb_000477_010 0.1102286733 - - PREDICTED: potassium channel AKT1-like [Jatropha curcas]
11 Hb_144703_010 0.1102682595 - - Phospholipase A 2A, IIA,PLA2A [Theobroma cacao]
12 Hb_174101_010 0.1110233424 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
13 Hb_001269_530 0.1122695898 - - ATP-binding cassette transporter, putative [Ricinus communis]
14 Hb_000613_250 0.1136229324 - - PREDICTED: nudix hydrolase 2-like [Jatropha curcas]
15 Hb_001013_080 0.1204579851 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
16 Hb_000363_250 0.1218322256 - - PREDICTED: pirin-like protein [Malus domestica]
17 Hb_001143_140 0.1220702576 - - Aldehyde dehydrogenase, putative [Ricinus communis]
18 Hb_000816_050 0.123714498 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
19 Hb_003226_030 0.12825541 - - sucrose synthase 5 [Hevea brasiliensis]
20 Hb_000342_020 0.1298110894 - - bel1 homeotic protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003835_030 Hb_003835_030 Hb_008092_020 Hb_008092_020 Hb_003835_030--Hb_008092_020 Hb_001013_050 Hb_001013_050 Hb_003835_030--Hb_001013_050 Hb_002000_130 Hb_002000_130 Hb_003835_030--Hb_002000_130 Hb_000589_330 Hb_000589_330 Hb_003835_030--Hb_000589_330 Hb_005034_010 Hb_005034_010 Hb_003835_030--Hb_005034_010 Hb_000472_020 Hb_000472_020 Hb_003835_030--Hb_000472_020 Hb_174101_010 Hb_174101_010 Hb_008092_020--Hb_174101_010 Hb_008092_020--Hb_001013_050 Hb_000028_460 Hb_000028_460 Hb_008092_020--Hb_000028_460 Hb_008092_020--Hb_002000_130 Hb_008092_020--Hb_000472_020 Hb_001013_050--Hb_000589_330 Hb_001013_050--Hb_000472_020 Hb_000613_250 Hb_000613_250 Hb_001013_050--Hb_000613_250 Hb_002097_130 Hb_002097_130 Hb_001013_050--Hb_002097_130 Hb_003226_030 Hb_003226_030 Hb_002000_130--Hb_003226_030 Hb_002000_130--Hb_000028_460 Hb_001143_140 Hb_001143_140 Hb_002000_130--Hb_001143_140 Hb_000614_190 Hb_000614_190 Hb_002000_130--Hb_000614_190 Hb_007007_090 Hb_007007_090 Hb_000589_330--Hb_007007_090 Hb_001913_030 Hb_001913_030 Hb_000589_330--Hb_001913_030 Hb_000589_330--Hb_002097_130 Hb_001269_530 Hb_001269_530 Hb_000589_330--Hb_001269_530 Hb_001174_030 Hb_001174_030 Hb_005034_010--Hb_001174_030 Hb_003562_040 Hb_003562_040 Hb_005034_010--Hb_003562_040 Hb_005054_280 Hb_005054_280 Hb_005034_010--Hb_005054_280 Hb_005034_010--Hb_174101_010 Hb_005034_010--Hb_000614_190 Hb_001544_070 Hb_001544_070 Hb_000472_020--Hb_001544_070 Hb_000472_020--Hb_000613_250 Hb_000472_020--Hb_001174_030 Hb_144703_010 Hb_144703_010 Hb_000472_020--Hb_144703_010 Hb_000472_020--Hb_174101_010 Hb_000342_020 Hb_000342_020 Hb_000472_020--Hb_000342_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0203184 7.20712 2.30768 7.50035 0.041934 0.0797152
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0569291 0.0671987 0.0428614 3.06031 4.42217

CAGE analysis