Hb_187991_010

Information

Type -
Description -
Location Contig187991: 40-561
Sequence    

Annotation

kegg
ID pop:POPTR_0017s09520g
description hypothetical protein
nr
ID KDP42829.1
description hypothetical protein JCGZ_23771 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID A0A067LFF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23771 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_187991_010 0.0 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
2 Hb_000359_280 0.0618559628 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
3 Hb_063523_010 0.0697762596 - - -
4 Hb_001102_270 0.0995981342 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
5 Hb_031862_020 0.107347143 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
6 Hb_005542_040 0.1127410636 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
7 Hb_000008_080 0.1170193972 - - conserved hypothetical protein [Ricinus communis]
8 Hb_107809_010 0.1195196481 - - JHL06P13.14 [Jatropha curcas]
9 Hb_011472_020 0.1196587949 - - PREDICTED: mucin-17-like [Jatropha curcas]
10 Hb_039022_020 0.122020289 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
11 Hb_000046_590 0.1285689894 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
12 Hb_000108_090 0.1295973273 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
13 Hb_166009_010 0.1310097759 - - carbonyl reductase, putative [Ricinus communis]
14 Hb_005628_050 0.1337699842 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
15 Hb_008783_020 0.1356263246 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
16 Hb_075449_040 0.1365246559 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
17 Hb_000382_030 0.1366597999 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
18 Hb_000163_250 0.1368325542 - - unnamed protein product [Vitis vinifera]
19 Hb_001634_080 0.1373332079 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
20 Hb_000501_110 0.1383181687 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Populus euphratica]

Gene co-expression network

sample Hb_187991_010 Hb_187991_010 Hb_000359_280 Hb_000359_280 Hb_187991_010--Hb_000359_280 Hb_063523_010 Hb_063523_010 Hb_187991_010--Hb_063523_010 Hb_001102_270 Hb_001102_270 Hb_187991_010--Hb_001102_270 Hb_031862_020 Hb_031862_020 Hb_187991_010--Hb_031862_020 Hb_005542_040 Hb_005542_040 Hb_187991_010--Hb_005542_040 Hb_000008_080 Hb_000008_080 Hb_187991_010--Hb_000008_080 Hb_000359_280--Hb_001102_270 Hb_000359_280--Hb_063523_010 Hb_008783_020 Hb_008783_020 Hb_000359_280--Hb_008783_020 Hb_000359_280--Hb_000008_080 Hb_007765_140 Hb_007765_140 Hb_000359_280--Hb_007765_140 Hb_063523_010--Hb_001102_270 Hb_033045_010 Hb_033045_010 Hb_063523_010--Hb_033045_010 Hb_107809_010 Hb_107809_010 Hb_063523_010--Hb_107809_010 Hb_063523_010--Hb_031862_020 Hb_001102_270--Hb_008783_020 Hb_001355_110 Hb_001355_110 Hb_001102_270--Hb_001355_110 Hb_001102_270--Hb_007765_140 Hb_167272_010 Hb_167272_010 Hb_031862_020--Hb_167272_010 Hb_000237_070 Hb_000237_070 Hb_031862_020--Hb_000237_070 Hb_000501_040 Hb_000501_040 Hb_031862_020--Hb_000501_040 Hb_000085_220 Hb_000085_220 Hb_031862_020--Hb_000085_220 Hb_000382_030 Hb_000382_030 Hb_031862_020--Hb_000382_030 Hb_007420_010 Hb_007420_010 Hb_031862_020--Hb_007420_010 Hb_005542_040--Hb_107809_010 Hb_007676_040 Hb_007676_040 Hb_005542_040--Hb_007676_040 Hb_005276_220 Hb_005276_220 Hb_005542_040--Hb_005276_220 Hb_001318_120 Hb_001318_120 Hb_005542_040--Hb_001318_120 Hb_000108_090 Hb_000108_090 Hb_005542_040--Hb_000108_090 Hb_011472_020 Hb_011472_020 Hb_005542_040--Hb_011472_020 Hb_000163_250 Hb_000163_250 Hb_000008_080--Hb_000163_250 Hb_001894_040 Hb_001894_040 Hb_000008_080--Hb_001894_040 Hb_001636_010 Hb_001636_010 Hb_000008_080--Hb_001636_010 Hb_000008_080--Hb_001102_270 Hb_000085_230 Hb_000085_230 Hb_000008_080--Hb_000085_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.29797 1.05519 0.448449 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.38467 0.371086

CAGE analysis