Hb_001355_110

Information

Type -
Description -
Location Contig1355: 91749-93749
Sequence    

Annotation

kegg
ID rcu:RCOM_0534830
description ATP binding protein, putative
nr
ID XP_012092605.1
description PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
swissprot
ID Q9P6Q3
description Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
trembl
ID A0A067LBF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22150 PE=3 SV=1
Gene Ontology
ID GO:0005524
description probable mitochondrial chaperone bcs1-b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001355_110 0.0 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
2 Hb_001266_020 0.0836350571 - - PREDICTED: uncharacterized protein LOC105650395 [Jatropha curcas]
3 Hb_001623_470 0.0905009646 - - ammonium transporter, putative [Ricinus communis]
4 Hb_001621_020 0.090573381 - - -
5 Hb_001102_270 0.09471336 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
6 Hb_012753_200 0.097743406 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
7 Hb_000489_020 0.1011267398 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
8 Hb_002805_150 0.1070008063 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
9 Hb_000579_180 0.1233585706 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
10 Hb_007765_140 0.1236168205 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
11 Hb_003807_020 0.1237386462 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
12 Hb_006949_030 0.1239125702 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_000085_230 0.1244300582 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
14 Hb_000836_390 0.1285094657 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
15 Hb_000335_050 0.1295078914 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
16 Hb_000359_280 0.1304245795 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
17 Hb_001514_210 0.1319920187 - - hypothetical protein VITISV_012133 [Vitis vinifera]
18 Hb_002007_140 0.1331193336 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER-like [Populus euphratica]
19 Hb_004447_020 0.1333490507 - - carbohydrate binding protein, putative [Ricinus communis]
20 Hb_001838_010 0.1351839525 - - hypothetical protein POPTR_0005s18380g [Populus trichocarpa]

Gene co-expression network

sample Hb_001355_110 Hb_001355_110 Hb_001266_020 Hb_001266_020 Hb_001355_110--Hb_001266_020 Hb_001623_470 Hb_001623_470 Hb_001355_110--Hb_001623_470 Hb_001621_020 Hb_001621_020 Hb_001355_110--Hb_001621_020 Hb_001102_270 Hb_001102_270 Hb_001355_110--Hb_001102_270 Hb_012753_200 Hb_012753_200 Hb_001355_110--Hb_012753_200 Hb_000489_020 Hb_000489_020 Hb_001355_110--Hb_000489_020 Hb_001266_020--Hb_001623_470 Hb_001266_020--Hb_012753_200 Hb_002805_150 Hb_002805_150 Hb_001266_020--Hb_002805_150 Hb_006949_030 Hb_006949_030 Hb_001266_020--Hb_006949_030 Hb_001266_020--Hb_001621_020 Hb_001769_030 Hb_001769_030 Hb_001623_470--Hb_001769_030 Hb_001623_470--Hb_000489_020 Hb_005333_100 Hb_005333_100 Hb_001623_470--Hb_005333_100 Hb_000976_060 Hb_000976_060 Hb_001623_470--Hb_000976_060 Hb_001621_020--Hb_006949_030 Hb_001621_020--Hb_001102_270 Hb_004079_110 Hb_004079_110 Hb_001621_020--Hb_004079_110 Hb_162286_030 Hb_162286_030 Hb_001621_020--Hb_162286_030 Hb_000359_280 Hb_000359_280 Hb_001102_270--Hb_000359_280 Hb_008783_020 Hb_008783_020 Hb_001102_270--Hb_008783_020 Hb_187991_010 Hb_187991_010 Hb_001102_270--Hb_187991_010 Hb_063523_010 Hb_063523_010 Hb_001102_270--Hb_063523_010 Hb_007765_140 Hb_007765_140 Hb_001102_270--Hb_007765_140 Hb_012753_200--Hb_002805_150 Hb_000579_180 Hb_000579_180 Hb_012753_200--Hb_000579_180 Hb_003807_020 Hb_003807_020 Hb_012753_200--Hb_003807_020 Hb_002007_140 Hb_002007_140 Hb_012753_200--Hb_002007_140 Hb_012395_070 Hb_012395_070 Hb_012753_200--Hb_012395_070 Hb_001514_210 Hb_001514_210 Hb_012753_200--Hb_001514_210 Hb_000265_020 Hb_000265_020 Hb_000489_020--Hb_000265_020 Hb_000489_020--Hb_005333_100 Hb_152718_010 Hb_152718_010 Hb_000489_020--Hb_152718_010 Hb_000489_020--Hb_001769_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 8.22105 2.27788 1.60937 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0579235 0 0 9.58709 1.09929

CAGE analysis