Hb_000579_180

Information

Type transcription factor
Description TF Family: bZIP
Location Contig579: 181510-182686
Sequence    

Annotation

kegg
ID rcu:RCOM_1595650
description Ocs element-binding factor, putative
nr
ID XP_012071923.1
description PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
swissprot
ID P24068
description Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2
trembl
ID A0A067KQY2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04477 PE=4 SV=1
Gene Ontology
ID GO:0003700
description ocs element-binding factor 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000579_180 0.0 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
2 Hb_012753_200 0.0761263804 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
3 Hb_003807_020 0.0800262941 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
4 Hb_000085_230 0.0857043547 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
5 Hb_010926_010 0.0869280236 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
6 Hb_012807_060 0.0871506807 - - ABC transporter family protein [Hevea brasiliensis]
7 Hb_001894_040 0.0876438572 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
8 Hb_000335_050 0.0900162737 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
9 Hb_001514_210 0.0964877698 - - hypothetical protein VITISV_012133 [Vitis vinifera]
10 Hb_002805_150 0.0971454623 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
11 Hb_002007_140 0.0998028608 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER-like [Populus euphratica]
12 Hb_004447_020 0.1020579246 - - carbohydrate binding protein, putative [Ricinus communis]
13 Hb_009581_050 0.1068036303 - - hypothetical protein CISIN_1g0025812mg, partial [Citrus sinensis]
14 Hb_001862_060 0.1077030244 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
15 Hb_003376_200 0.1085553213 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
16 Hb_006711_020 0.1133523436 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
17 Hb_000836_390 0.1143117248 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
18 Hb_008226_120 0.1163713796 - - ATP binding protein, putative [Ricinus communis]
19 Hb_009581_040 0.1228347767 - - hypothetical protein B456_011G052100 [Gossypium raimondii]
20 Hb_001355_110 0.1233585706 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000579_180 Hb_000579_180 Hb_012753_200 Hb_012753_200 Hb_000579_180--Hb_012753_200 Hb_003807_020 Hb_003807_020 Hb_000579_180--Hb_003807_020 Hb_000085_230 Hb_000085_230 Hb_000579_180--Hb_000085_230 Hb_010926_010 Hb_010926_010 Hb_000579_180--Hb_010926_010 Hb_012807_060 Hb_012807_060 Hb_000579_180--Hb_012807_060 Hb_001894_040 Hb_001894_040 Hb_000579_180--Hb_001894_040 Hb_002805_150 Hb_002805_150 Hb_012753_200--Hb_002805_150 Hb_012753_200--Hb_003807_020 Hb_002007_140 Hb_002007_140 Hb_012753_200--Hb_002007_140 Hb_012395_070 Hb_012395_070 Hb_012753_200--Hb_012395_070 Hb_001514_210 Hb_001514_210 Hb_012753_200--Hb_001514_210 Hb_000335_050 Hb_000335_050 Hb_003807_020--Hb_000335_050 Hb_004447_020 Hb_004447_020 Hb_003807_020--Hb_004447_020 Hb_003807_020--Hb_002007_140 Hb_009581_050 Hb_009581_050 Hb_003807_020--Hb_009581_050 Hb_002391_350 Hb_002391_350 Hb_003807_020--Hb_002391_350 Hb_000085_230--Hb_001894_040 Hb_000085_230--Hb_001514_210 Hb_000085_230--Hb_012753_200 Hb_000008_080 Hb_000008_080 Hb_000085_230--Hb_000008_080 Hb_000836_390 Hb_000836_390 Hb_000085_230--Hb_000836_390 Hb_010926_010--Hb_000335_050 Hb_006711_020 Hb_006711_020 Hb_010926_010--Hb_006711_020 Hb_010926_010--Hb_003807_020 Hb_010926_010--Hb_012807_060 Hb_001421_010 Hb_001421_010 Hb_010926_010--Hb_001421_010 Hb_012807_060--Hb_009581_050 Hb_003052_120 Hb_003052_120 Hb_012807_060--Hb_003052_120 Hb_002551_090 Hb_002551_090 Hb_012807_060--Hb_002551_090 Hb_003430_020 Hb_003430_020 Hb_012807_060--Hb_003430_020 Hb_008226_120 Hb_008226_120 Hb_012807_060--Hb_008226_120 Hb_001894_040--Hb_008226_120 Hb_046101_010 Hb_046101_010 Hb_001894_040--Hb_046101_010 Hb_001862_060 Hb_001862_060 Hb_001894_040--Hb_001862_060 Hb_001636_010 Hb_001636_010 Hb_001894_040--Hb_001636_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.716368 78.1227 17.7762 28.8566 0.56172 1.27294
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.204893 0.376572 95.0227 14.1447

CAGE analysis