Hb_008111_020

Information

Type -
Description -
Location Contig8111: 19857-27380
Sequence    

Annotation

kegg
ID tcc:TCM_044741
description Receptor like protein 6, putative
nr
ID XP_007010787.1
description Receptor like protein 6, putative [Theobroma cacao]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID A0A061FSH2
description Receptor like protein 6, putative OS=Theobroma cacao GN=TCM_044741 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008111_020 0.0 - - Receptor like protein 6, putative [Theobroma cacao]
2 Hb_002157_180 0.0623104751 - - separase, putative [Ricinus communis]
3 Hb_003752_130 0.0658838208 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
4 Hb_047923_010 0.0807821544 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
5 Hb_001652_050 0.1088275299 - - -
6 Hb_000613_270 0.109354815 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
7 Hb_000059_290 0.1101645934 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
8 Hb_023774_010 0.1114646673 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
9 Hb_012702_020 0.1154818024 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
10 Hb_000408_010 0.1351342576 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
11 Hb_000343_280 0.1388389405 - - hypothetical protein JCGZ_24094 [Jatropha curcas]
12 Hb_015912_010 0.1398956036 - - cytochrome P450, putative [Ricinus communis]
13 Hb_000203_030 0.1414869233 - - -
14 Hb_003086_180 0.1422847191 - - PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri]
15 Hb_100873_040 0.145165722 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
16 Hb_157122_010 0.1503351933 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
17 Hb_005306_040 0.158793789 - - calmodulin binding protein, putative [Ricinus communis]
18 Hb_003085_050 0.1589635869 - - Polygalacturonase non-catalytic subunit AroGP3 precursor, putative [Ricinus communis]
19 Hb_079158_010 0.1598866902 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
20 Hb_000101_060 0.1627823754 - - -

Gene co-expression network

sample Hb_008111_020 Hb_008111_020 Hb_002157_180 Hb_002157_180 Hb_008111_020--Hb_002157_180 Hb_003752_130 Hb_003752_130 Hb_008111_020--Hb_003752_130 Hb_047923_010 Hb_047923_010 Hb_008111_020--Hb_047923_010 Hb_001652_050 Hb_001652_050 Hb_008111_020--Hb_001652_050 Hb_000613_270 Hb_000613_270 Hb_008111_020--Hb_000613_270 Hb_000059_290 Hb_000059_290 Hb_008111_020--Hb_000059_290 Hb_002157_180--Hb_001652_050 Hb_002157_180--Hb_047923_010 Hb_157122_010 Hb_157122_010 Hb_002157_180--Hb_157122_010 Hb_002157_180--Hb_003752_130 Hb_003085_050 Hb_003085_050 Hb_002157_180--Hb_003085_050 Hb_012702_020 Hb_012702_020 Hb_003752_130--Hb_012702_020 Hb_015912_010 Hb_015912_010 Hb_003752_130--Hb_015912_010 Hb_000101_060 Hb_000101_060 Hb_003752_130--Hb_000101_060 Hb_000291_020 Hb_000291_020 Hb_003752_130--Hb_000291_020 Hb_047923_010--Hb_000613_270 Hb_023774_010 Hb_023774_010 Hb_047923_010--Hb_023774_010 Hb_047923_010--Hb_001652_050 Hb_003086_180 Hb_003086_180 Hb_047923_010--Hb_003086_180 Hb_001652_050--Hb_023774_010 Hb_001652_050--Hb_000613_270 Hb_001652_050--Hb_003086_180 Hb_000613_270--Hb_023774_010 Hb_000613_270--Hb_003086_180 Hb_089843_010 Hb_089843_010 Hb_000613_270--Hb_089843_010 Hb_000613_270--Hb_002157_180 Hb_000203_030 Hb_000203_030 Hb_000059_290--Hb_000203_030 Hb_000408_010 Hb_000408_010 Hb_000059_290--Hb_000408_010 Hb_001998_190 Hb_001998_190 Hb_000059_290--Hb_001998_190 Hb_000059_290--Hb_047923_010 Hb_100873_040 Hb_100873_040 Hb_000059_290--Hb_100873_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0340969 0.0166846 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0353696 0

CAGE analysis