Hb_089843_010

Information

Type -
Description -
Location Contig89843: 627-866
Sequence    

Annotation

kegg
ID cic:CICLE_v10031934mg
description hypothetical protein
nr
ID KDP20395.1
description hypothetical protein JCGZ_05278 [Jatropha curcas]
swissprot
ID D4N501
description Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1
trembl
ID A0A067JK56
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05278 PE=3 SV=1
Gene Ontology
ID GO:0016706
description protein srg1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089843_010 0.0 - - hypothetical protein JCGZ_05278 [Jatropha curcas]
2 Hb_174514_010 0.0291864368 - - flavin-containing monooxygenase family protein [Populus trichocarpa]
3 Hb_003086_180 0.0542088728 - - PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri]
4 Hb_023774_010 0.0833730241 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
5 Hb_000613_270 0.0846802825 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
6 Hb_047923_010 0.1133567362 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
7 Hb_001652_050 0.1152131827 - - -
8 Hb_001006_200 0.1341916976 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
9 Hb_002553_100 0.1575865992 transcription factor TF Family: ERF Ethylene-responsive transcription factor [Morus notabilis]
10 Hb_099198_010 0.177889066 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 isoform X2 [Nicotiana tomentosiformis]
11 Hb_000059_290 0.1803198868 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
12 Hb_002157_180 0.1823626457 - - separase, putative [Ricinus communis]
13 Hb_000203_030 0.1867639853 - - -
14 Hb_008111_020 0.1927088464 - - Receptor like protein 6, putative [Theobroma cacao]
15 Hb_142734_020 0.1928379608 - - PREDICTED: uncharacterized protein LOC105764710 isoform X1 [Gossypium raimondii]
16 Hb_084495_010 0.1961335263 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Eucalyptus grandis]
17 Hb_007645_110 0.2128563966 transcription factor TF Family: ERF hypothetical protein RCOM_0089590 [Ricinus communis]
18 Hb_002435_080 0.2135854585 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000220_170 0.2163557124 - - -
20 Hb_100873_040 0.2167836962 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_089843_010 Hb_089843_010 Hb_174514_010 Hb_174514_010 Hb_089843_010--Hb_174514_010 Hb_003086_180 Hb_003086_180 Hb_089843_010--Hb_003086_180 Hb_023774_010 Hb_023774_010 Hb_089843_010--Hb_023774_010 Hb_000613_270 Hb_000613_270 Hb_089843_010--Hb_000613_270 Hb_047923_010 Hb_047923_010 Hb_089843_010--Hb_047923_010 Hb_001652_050 Hb_001652_050 Hb_089843_010--Hb_001652_050 Hb_174514_010--Hb_003086_180 Hb_174514_010--Hb_023774_010 Hb_174514_010--Hb_000613_270 Hb_174514_010--Hb_047923_010 Hb_174514_010--Hb_001652_050 Hb_003086_180--Hb_023774_010 Hb_003086_180--Hb_000613_270 Hb_003086_180--Hb_001652_050 Hb_003086_180--Hb_047923_010 Hb_023774_010--Hb_000613_270 Hb_023774_010--Hb_047923_010 Hb_023774_010--Hb_001652_050 Hb_002157_180 Hb_002157_180 Hb_023774_010--Hb_002157_180 Hb_000613_270--Hb_047923_010 Hb_000613_270--Hb_001652_050 Hb_000613_270--Hb_002157_180 Hb_047923_010--Hb_001652_050 Hb_008111_020 Hb_008111_020 Hb_047923_010--Hb_008111_020 Hb_047923_010--Hb_002157_180 Hb_001652_050--Hb_002157_180 Hb_001652_050--Hb_008111_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.718543 1.10552 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.87369 0

CAGE analysis