Hb_174514_010

Information

Type -
Description -
Location Contig174514: 1071-1874
Sequence    

Annotation

kegg
ID pop:POPTR_0006s13990g
description flavin-containing monooxygenase family protein
nr
ID XP_006381572.1
description flavin-containing monooxygenase family protein [Populus trichocarpa]
swissprot
ID Q9LMA1
description Probable flavin-containing monooxygenase 1 OS=Arabidopsis thaliana GN=FMO1 PE=2 SV=1
trembl
ID B9MT30
description Flavin-containing monooxygenase family protein OS=Populus trichocarpa GN=POPTR_0006s13990g PE=4 SV=1
Gene Ontology
ID GO:0004499
description probable flavin-containing monooxygenase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_174514_010 0.0 - - flavin-containing monooxygenase family protein [Populus trichocarpa]
2 Hb_089843_010 0.0291864368 - - hypothetical protein JCGZ_05278 [Jatropha curcas]
3 Hb_003086_180 0.0784664207 - - PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri]
4 Hb_023774_010 0.1043409314 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
5 Hb_000613_270 0.1046121807 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
6 Hb_047923_010 0.1296197784 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
7 Hb_001652_050 0.1413367113 - - -
8 Hb_001006_200 0.1527552556 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
9 Hb_002553_100 0.1548989339 transcription factor TF Family: ERF Ethylene-responsive transcription factor [Morus notabilis]
10 Hb_142734_020 0.1659763662 - - PREDICTED: uncharacterized protein LOC105764710 isoform X1 [Gossypium raimondii]
11 Hb_000059_290 0.1814153842 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
12 Hb_000203_030 0.1829105854 - - -
13 Hb_007645_110 0.1907020746 transcription factor TF Family: ERF hypothetical protein RCOM_0089590 [Ricinus communis]
14 Hb_099198_010 0.202976218 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 isoform X2 [Nicotiana tomentosiformis]
15 Hb_002157_180 0.205388917 - - separase, putative [Ricinus communis]
16 Hb_008111_020 0.209302009 - - Receptor like protein 6, putative [Theobroma cacao]
17 Hb_001789_010 0.2188300339 - - hypothetical protein POPTR_0015s13020g [Populus trichocarpa]
18 Hb_100873_040 0.219065883 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
19 Hb_084495_010 0.2211738244 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Eucalyptus grandis]
20 Hb_000220_170 0.2247514476 - - -

Gene co-expression network

sample Hb_174514_010 Hb_174514_010 Hb_089843_010 Hb_089843_010 Hb_174514_010--Hb_089843_010 Hb_003086_180 Hb_003086_180 Hb_174514_010--Hb_003086_180 Hb_023774_010 Hb_023774_010 Hb_174514_010--Hb_023774_010 Hb_000613_270 Hb_000613_270 Hb_174514_010--Hb_000613_270 Hb_047923_010 Hb_047923_010 Hb_174514_010--Hb_047923_010 Hb_001652_050 Hb_001652_050 Hb_174514_010--Hb_001652_050 Hb_089843_010--Hb_003086_180 Hb_089843_010--Hb_023774_010 Hb_089843_010--Hb_000613_270 Hb_089843_010--Hb_047923_010 Hb_089843_010--Hb_001652_050 Hb_003086_180--Hb_023774_010 Hb_003086_180--Hb_000613_270 Hb_003086_180--Hb_001652_050 Hb_003086_180--Hb_047923_010 Hb_023774_010--Hb_000613_270 Hb_023774_010--Hb_047923_010 Hb_023774_010--Hb_001652_050 Hb_002157_180 Hb_002157_180 Hb_023774_010--Hb_002157_180 Hb_000613_270--Hb_047923_010 Hb_000613_270--Hb_001652_050 Hb_000613_270--Hb_002157_180 Hb_047923_010--Hb_001652_050 Hb_008111_020 Hb_008111_020 Hb_047923_010--Hb_008111_020 Hb_047923_010--Hb_002157_180 Hb_001652_050--Hb_002157_180 Hb_001652_050--Hb_008111_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0301097 0.0540746 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0792583 0

CAGE analysis