Hb_000408_010

Information

Type -
Description -
Location Contig408: 751-3188
Sequence    

Annotation

kegg
ID tcc:TCM_039419
description OSBP(oxysterol binding protein)-related protein 4B
nr
ID XP_012084542.1
description PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
swissprot
ID Q9LVD4
description Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana GN=ORP4C PE=2 SV=1
trembl
ID A0A067JU81
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19813 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000408_010 0.0 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
2 Hb_001998_190 0.066682522 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
3 Hb_002481_070 0.0683117131 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
4 Hb_000059_290 0.0774133385 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
5 Hb_000203_030 0.0849864993 - - -
6 Hb_000507_010 0.1050465969 - - hypothetical protein POPTR_0007s02420g [Populus trichocarpa]
7 Hb_019952_010 0.1099774707 - - -
8 Hb_000933_120 0.1152135192 - - hypothetical protein L484_011925 [Morus notabilis]
9 Hb_100873_040 0.1222642629 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
10 Hb_008111_020 0.1351342576 - - Receptor like protein 6, putative [Theobroma cacao]
11 Hb_005545_090 0.1353336212 - - -
12 Hb_003752_130 0.1444985099 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
13 Hb_000343_280 0.1457717919 - - hypothetical protein JCGZ_24094 [Jatropha curcas]
14 Hb_005306_040 0.151708474 - - calmodulin binding protein, putative [Ricinus communis]
15 Hb_002787_100 0.151762626 - - PREDICTED: uncharacterized protein LOC105637209 [Jatropha curcas]
16 Hb_000523_060 0.1520973335 - - -
17 Hb_001300_120 0.1636950974 - - PREDICTED: stress response protein nst1-like [Jatropha curcas]
18 Hb_047923_010 0.164797919 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
19 Hb_001246_150 0.1650835603 - - hypothetical protein MIMGU_mgv1a021562mg [Erythranthe guttata]
20 Hb_000856_330 0.1650846089 - - PREDICTED: protein QUIRKY isoform X1 [Cicer arietinum]

Gene co-expression network

sample Hb_000408_010 Hb_000408_010 Hb_001998_190 Hb_001998_190 Hb_000408_010--Hb_001998_190 Hb_002481_070 Hb_002481_070 Hb_000408_010--Hb_002481_070 Hb_000059_290 Hb_000059_290 Hb_000408_010--Hb_000059_290 Hb_000203_030 Hb_000203_030 Hb_000408_010--Hb_000203_030 Hb_000507_010 Hb_000507_010 Hb_000408_010--Hb_000507_010 Hb_019952_010 Hb_019952_010 Hb_000408_010--Hb_019952_010 Hb_001998_190--Hb_000507_010 Hb_000933_120 Hb_000933_120 Hb_001998_190--Hb_000933_120 Hb_001998_190--Hb_019952_010 Hb_001998_190--Hb_000203_030 Hb_001998_190--Hb_000059_290 Hb_000523_060 Hb_000523_060 Hb_002481_070--Hb_000523_060 Hb_002787_100 Hb_002787_100 Hb_002481_070--Hb_002787_100 Hb_005545_090 Hb_005545_090 Hb_002481_070--Hb_005545_090 Hb_002481_070--Hb_001998_190 Hb_000291_020 Hb_000291_020 Hb_002481_070--Hb_000291_020 Hb_000059_290--Hb_000203_030 Hb_047923_010 Hb_047923_010 Hb_000059_290--Hb_047923_010 Hb_100873_040 Hb_100873_040 Hb_000059_290--Hb_100873_040 Hb_008111_020 Hb_008111_020 Hb_000059_290--Hb_008111_020 Hb_000203_030--Hb_100873_040 Hb_001246_150 Hb_001246_150 Hb_000203_030--Hb_001246_150 Hb_000203_030--Hb_000507_010 Hb_000507_010--Hb_000933_120 Hb_000507_010--Hb_019952_010 Hb_000976_420 Hb_000976_420 Hb_000507_010--Hb_000976_420 Hb_000856_330 Hb_000856_330 Hb_000507_010--Hb_000856_330 Hb_001300_120 Hb_001300_120 Hb_000507_010--Hb_001300_120 Hb_019952_010--Hb_000933_120 Hb_019952_010--Hb_000976_420 Hb_019952_010--Hb_000856_330 Hb_019952_010--Hb_001300_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.391389 0.244604 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.231837 0

CAGE analysis