Hb_000523_060

Information

Type -
Description -
Location Contig523: 95983-102577
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000523_060 0.0 - - -
2 Hb_002787_100 0.0554068101 - - PREDICTED: uncharacterized protein LOC105637209 [Jatropha curcas]
3 Hb_002481_070 0.0841040123 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
4 Hb_000291_020 0.0867896031 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
5 Hb_124207_010 0.0988540491 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_000878_150 0.1036779266 - - Gibberellin receptor GID1, putative [Ricinus communis]
7 Hb_005545_090 0.1091063018 - - -
8 Hb_001021_110 0.1255396212 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
9 Hb_000510_350 0.1338294603 - - Putative polyprotein [Oryza sativa Japonica Group]
10 Hb_012553_010 0.1465867101 - - hypothetical protein JCGZ_10552 [Jatropha curcas]
11 Hb_000408_010 0.1520973335 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
12 Hb_168039_020 0.1522267073 - - -
13 Hb_025030_010 0.1672384936 - - -
14 Hb_004785_120 0.1747431182 - - Receptor protein kinase 1 [Theobroma cacao]
15 Hb_001300_120 0.1794447811 - - PREDICTED: stress response protein nst1-like [Jatropha curcas]
16 Hb_000035_300 0.1824047607 - - conserved hypothetical protein [Ricinus communis]
17 Hb_051450_010 0.1836678536 - - conserved hypothetical protein [Ricinus communis]
18 Hb_166257_010 0.1851488842 - - hypothetical protein JCGZ_21808 [Jatropha curcas]
19 Hb_003752_130 0.1868798841 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
20 Hb_019952_010 0.1904014486 - - -

Gene co-expression network

sample Hb_000523_060 Hb_000523_060 Hb_002787_100 Hb_002787_100 Hb_000523_060--Hb_002787_100 Hb_002481_070 Hb_002481_070 Hb_000523_060--Hb_002481_070 Hb_000291_020 Hb_000291_020 Hb_000523_060--Hb_000291_020 Hb_124207_010 Hb_124207_010 Hb_000523_060--Hb_124207_010 Hb_000878_150 Hb_000878_150 Hb_000523_060--Hb_000878_150 Hb_005545_090 Hb_005545_090 Hb_000523_060--Hb_005545_090 Hb_002787_100--Hb_000291_020 Hb_002787_100--Hb_124207_010 Hb_002787_100--Hb_002481_070 Hb_012553_010 Hb_012553_010 Hb_002787_100--Hb_012553_010 Hb_002787_100--Hb_000878_150 Hb_000408_010 Hb_000408_010 Hb_002481_070--Hb_000408_010 Hb_002481_070--Hb_005545_090 Hb_001998_190 Hb_001998_190 Hb_002481_070--Hb_001998_190 Hb_002481_070--Hb_000291_020 Hb_000291_020--Hb_124207_010 Hb_000291_020--Hb_012553_010 Hb_166257_010 Hb_166257_010 Hb_000291_020--Hb_166257_010 Hb_124207_010--Hb_012553_010 Hb_124207_010--Hb_166257_010 Hb_001268_070 Hb_001268_070 Hb_124207_010--Hb_001268_070 Hb_000878_150--Hb_000291_020 Hb_000878_150--Hb_124207_010 Hb_000510_350 Hb_000510_350 Hb_000878_150--Hb_000510_350 Hb_000878_150--Hb_002481_070 Hb_001300_120 Hb_001300_120 Hb_005545_090--Hb_001300_120 Hb_000856_330 Hb_000856_330 Hb_005545_090--Hb_000856_330 Hb_019952_010 Hb_019952_010 Hb_005545_090--Hb_019952_010 Hb_000507_010 Hb_000507_010 Hb_005545_090--Hb_000507_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.06452 0.0193214 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0187385 0

CAGE analysis