Hb_002787_100

Information

Type -
Description -
Location Contig2787: 108216-108893
Sequence    

Annotation

kegg
ID pop:POPTR_0001s30690g
description POPTRDRAFT_549955; plant basic secretory family protein
nr
ID XP_012076020.1
description PREDICTED: uncharacterized protein LOC105637209 [Jatropha curcas]
swissprot
ID C0HJG8
description Basic secretory protease (Fragments) OS=Boswellia serrata PE=1 SV=1
trembl
ID A0A067LBY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15477 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002787_100 0.0 - - PREDICTED: uncharacterized protein LOC105637209 [Jatropha curcas]
2 Hb_000291_020 0.0351856285 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
3 Hb_000523_060 0.0554068101 - - -
4 Hb_124207_010 0.0624604506 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_002481_070 0.0911367237 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
6 Hb_012553_010 0.1201334144 - - hypothetical protein JCGZ_10552 [Jatropha curcas]
7 Hb_000878_150 0.125891614 - - Gibberellin receptor GID1, putative [Ricinus communis]
8 Hb_166257_010 0.1356518541 - - hypothetical protein JCGZ_21808 [Jatropha curcas]
9 Hb_003752_130 0.1422974496 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
10 Hb_000408_010 0.151762626 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
11 Hb_001021_110 0.1517757677 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
12 Hb_000035_300 0.1520983789 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000510_350 0.15482575 - - Putative polyprotein [Oryza sativa Japonica Group]
14 Hb_005545_090 0.1549644834 - - -
15 Hb_012702_020 0.1628826811 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
16 Hb_015912_010 0.1646879154 - - cytochrome P450, putative [Ricinus communis]
17 Hb_001268_070 0.1746523525 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000070_140 0.1777058335 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
19 Hb_000101_060 0.1832353499 - - -
20 Hb_000512_080 0.1858427824 - - ankyrin repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002787_100 Hb_002787_100 Hb_000291_020 Hb_000291_020 Hb_002787_100--Hb_000291_020 Hb_000523_060 Hb_000523_060 Hb_002787_100--Hb_000523_060 Hb_124207_010 Hb_124207_010 Hb_002787_100--Hb_124207_010 Hb_002481_070 Hb_002481_070 Hb_002787_100--Hb_002481_070 Hb_012553_010 Hb_012553_010 Hb_002787_100--Hb_012553_010 Hb_000878_150 Hb_000878_150 Hb_002787_100--Hb_000878_150 Hb_000291_020--Hb_124207_010 Hb_000291_020--Hb_000523_060 Hb_000291_020--Hb_012553_010 Hb_166257_010 Hb_166257_010 Hb_000291_020--Hb_166257_010 Hb_000291_020--Hb_002481_070 Hb_000523_060--Hb_002481_070 Hb_000523_060--Hb_124207_010 Hb_000523_060--Hb_000878_150 Hb_005545_090 Hb_005545_090 Hb_000523_060--Hb_005545_090 Hb_124207_010--Hb_012553_010 Hb_124207_010--Hb_166257_010 Hb_001268_070 Hb_001268_070 Hb_124207_010--Hb_001268_070 Hb_000408_010 Hb_000408_010 Hb_002481_070--Hb_000408_010 Hb_002481_070--Hb_005545_090 Hb_001998_190 Hb_001998_190 Hb_002481_070--Hb_001998_190 Hb_012553_010--Hb_001268_070 Hb_012553_010--Hb_166257_010 Hb_000070_140 Hb_000070_140 Hb_012553_010--Hb_000070_140 Hb_000878_150--Hb_000291_020 Hb_000878_150--Hb_124207_010 Hb_000510_350 Hb_000510_350 Hb_000878_150--Hb_000510_350 Hb_000878_150--Hb_002481_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.433836 0.11086 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.162597 0

CAGE analysis