Hb_015912_010

Information

Type -
Description -
Location Contig15912: 18177-20070
Sequence    

Annotation

kegg
ID rcu:RCOM_1593090
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_002510311.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID O49858
description Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1
trembl
ID B9R7L8
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1593090 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015912_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_012702_020 0.0590640929 - - retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
3 Hb_000101_060 0.0704331284 - - -
4 Hb_003752_130 0.0905069356 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
5 Hb_002400_250 0.1078594218 - - amino acid binding protein, putative [Ricinus communis]
6 Hb_166257_010 0.1216392009 - - hypothetical protein JCGZ_21808 [Jatropha curcas]
7 Hb_000035_300 0.1335645996 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000512_080 0.1373118658 - - ankyrin repeat-containing protein, putative [Ricinus communis]
9 Hb_008111_020 0.1398956036 - - Receptor like protein 6, putative [Theobroma cacao]
10 Hb_000291_020 0.1452898767 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
11 Hb_002157_180 0.1453828776 - - separase, putative [Ricinus communis]
12 Hb_003117_060 0.1540592567 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
13 Hb_003636_010 0.158569196 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
14 Hb_157122_010 0.1619963743 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
15 Hb_000322_200 0.1642438817 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]
16 Hb_009297_010 0.1643781219 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
17 Hb_002787_100 0.1646879154 - - PREDICTED: uncharacterized protein LOC105637209 [Jatropha curcas]
18 Hb_002553_080 0.1652148407 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096-like [Eucalyptus grandis]
19 Hb_003085_050 0.1654355504 - - Polygalacturonase non-catalytic subunit AroGP3 precursor, putative [Ricinus communis]
20 Hb_124207_010 0.1659235903 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_015912_010 Hb_015912_010 Hb_012702_020 Hb_012702_020 Hb_015912_010--Hb_012702_020 Hb_000101_060 Hb_000101_060 Hb_015912_010--Hb_000101_060 Hb_003752_130 Hb_003752_130 Hb_015912_010--Hb_003752_130 Hb_002400_250 Hb_002400_250 Hb_015912_010--Hb_002400_250 Hb_166257_010 Hb_166257_010 Hb_015912_010--Hb_166257_010 Hb_000035_300 Hb_000035_300 Hb_015912_010--Hb_000035_300 Hb_012702_020--Hb_000101_060 Hb_012702_020--Hb_003752_130 Hb_008111_020 Hb_008111_020 Hb_012702_020--Hb_008111_020 Hb_002157_180 Hb_002157_180 Hb_012702_020--Hb_002157_180 Hb_012702_020--Hb_166257_010 Hb_000101_060--Hb_166257_010 Hb_000101_060--Hb_003752_130 Hb_009297_010 Hb_009297_010 Hb_000101_060--Hb_009297_010 Hb_002553_080 Hb_002553_080 Hb_000101_060--Hb_002553_080 Hb_003752_130--Hb_008111_020 Hb_003752_130--Hb_002157_180 Hb_000291_020 Hb_000291_020 Hb_003752_130--Hb_000291_020 Hb_000462_020 Hb_000462_020 Hb_002400_250--Hb_000462_020 Hb_001424_080 Hb_001424_080 Hb_002400_250--Hb_001424_080 Hb_001663_100 Hb_001663_100 Hb_002400_250--Hb_001663_100 Hb_004931_060 Hb_004931_060 Hb_002400_250--Hb_004931_060 Hb_186298_010 Hb_186298_010 Hb_002400_250--Hb_186298_010 Hb_166257_010--Hb_009297_010 Hb_124207_010 Hb_124207_010 Hb_166257_010--Hb_124207_010 Hb_012553_010 Hb_012553_010 Hb_166257_010--Hb_012553_010 Hb_166257_010--Hb_000291_020 Hb_001268_070 Hb_001268_070 Hb_166257_010--Hb_001268_070 Hb_000512_080 Hb_000512_080 Hb_000035_300--Hb_000512_080 Hb_000035_300--Hb_000291_020 Hb_001481_030 Hb_001481_030 Hb_000035_300--Hb_001481_030 Hb_002787_100 Hb_002787_100 Hb_000035_300--Hb_002787_100 Hb_005306_040 Hb_005306_040 Hb_000035_300--Hb_005306_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.4412 0.281174 0.0185102 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.11613 0

CAGE analysis