Hb_007433_020

Information

Type -
Description -
Location Contig7433: 31577-35768
Sequence    

Annotation

kegg
ID rcu:RCOM_1115620
description receptor protein kinase, putative (EC:2.7.10.2)
nr
ID CAN62472.1
description hypothetical protein VITISV_005320 [Vitis vinifera]
swissprot
ID A8R7E6
description Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1 PE=1 SV=1
trembl
ID A5AH47
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005320 PE=4 SV=1
Gene Ontology
ID GO:0004672
description receptor protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007433_020 0.0 - - hypothetical protein VITISV_005320 [Vitis vinifera]
2 Hb_008667_020 0.0762929941 - - PREDICTED: uncharacterized protein LOC101299609 [Fragaria vesca subsp. vesca]
3 Hb_021596_070 0.0850270917 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
4 Hb_019961_010 0.1180161831 - - hypothetical protein POPTR_0017s11350g [Populus trichocarpa]
5 Hb_001411_150 0.1213051625 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
6 Hb_011054_030 0.121555093 - - PREDICTED: uncharacterized protein LOC103324687 [Prunus mume]
7 Hb_111985_060 0.12594433 - - PREDICTED: cytokinin dehydrogenase 5 [Jatropha curcas]
8 Hb_001568_060 0.1261467538 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
9 Hb_174380_010 0.1264573388 - - kinase, putative [Ricinus communis]
10 Hb_007383_050 0.1299978352 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
11 Hb_000395_030 0.1303474275 - - oligopeptide transporter, putative [Ricinus communis]
12 Hb_012545_080 0.1304156631 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
13 Hb_004712_140 0.131590371 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
14 Hb_025030_010 0.1315945869 - - -
15 Hb_002284_020 0.1325576038 - - PREDICTED: probable inorganic phosphate transporter 1-9 [Jatropha curcas]
16 Hb_002205_260 0.1345718434 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
17 Hb_006698_020 0.1347409303 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
18 Hb_009189_010 0.1348832902 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
19 Hb_055706_010 0.1390961737 - - hypothetical protein JCGZ_22222 [Jatropha curcas]
20 Hb_001289_030 0.1405057049 - - syntaxin, plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_007433_020 Hb_007433_020 Hb_008667_020 Hb_008667_020 Hb_007433_020--Hb_008667_020 Hb_021596_070 Hb_021596_070 Hb_007433_020--Hb_021596_070 Hb_019961_010 Hb_019961_010 Hb_007433_020--Hb_019961_010 Hb_001411_150 Hb_001411_150 Hb_007433_020--Hb_001411_150 Hb_011054_030 Hb_011054_030 Hb_007433_020--Hb_011054_030 Hb_111985_060 Hb_111985_060 Hb_007433_020--Hb_111985_060 Hb_008667_020--Hb_021596_070 Hb_008667_020--Hb_011054_030 Hb_008667_020--Hb_111985_060 Hb_007371_020 Hb_007371_020 Hb_008667_020--Hb_007371_020 Hb_004712_140 Hb_004712_140 Hb_008667_020--Hb_004712_140 Hb_010962_030 Hb_010962_030 Hb_021596_070--Hb_010962_030 Hb_021596_070--Hb_011054_030 Hb_021596_070--Hb_007371_020 Hb_021596_070--Hb_111985_060 Hb_012702_010 Hb_012702_010 Hb_019961_010--Hb_012702_010 Hb_138628_010 Hb_138628_010 Hb_019961_010--Hb_138628_010 Hb_000133_060 Hb_000133_060 Hb_019961_010--Hb_000133_060 Hb_002272_140 Hb_002272_140 Hb_019961_010--Hb_002272_140 Hb_019961_010--Hb_008667_020 Hb_007383_050 Hb_007383_050 Hb_001411_150--Hb_007383_050 Hb_009189_010 Hb_009189_010 Hb_001411_150--Hb_009189_010 Hb_001289_030 Hb_001289_030 Hb_001411_150--Hb_001289_030 Hb_004267_070 Hb_004267_070 Hb_001411_150--Hb_004267_070 Hb_001168_100 Hb_001168_100 Hb_001411_150--Hb_001168_100 Hb_089140_020 Hb_089140_020 Hb_001411_150--Hb_089140_020 Hb_000039_100 Hb_000039_100 Hb_011054_030--Hb_000039_100 Hb_005054_300 Hb_005054_300 Hb_011054_030--Hb_005054_300 Hb_011054_030--Hb_111985_060 Hb_029866_140 Hb_029866_140 Hb_011054_030--Hb_029866_140 Hb_003090_060 Hb_003090_060 Hb_111985_060--Hb_003090_060 Hb_111985_060--Hb_005054_300 Hb_002621_030 Hb_002621_030 Hb_111985_060--Hb_002621_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.126474 20.4715 3.63732 2.10938 0 0.0223192
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0456516 0 2.68798 0.740921

CAGE analysis