Hb_025030_010

Information

Type -
Description -
Location Contig25030: 12636-15897
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025030_010 0.0 - - -
2 Hb_051450_010 0.0999257193 - - conserved hypothetical protein [Ricinus communis]
3 Hb_028841_020 0.1134923195 - - hypothetical protein CISIN_1g041345mg [Citrus sinensis]
4 Hb_001568_060 0.1236493383 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
5 Hb_001021_110 0.1263820922 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
6 Hb_007433_020 0.1315945869 - - hypothetical protein VITISV_005320 [Vitis vinifera]
7 Hb_000510_350 0.1335715547 - - Putative polyprotein [Oryza sativa Japonica Group]
8 Hb_004931_050 0.1361359587 transcription factor TF Family: MYB-related Transcription repressor MYB4, putative [Ricinus communis]
9 Hb_168039_020 0.1381228525 - - -
10 Hb_008667_020 0.1391295801 - - PREDICTED: uncharacterized protein LOC101299609 [Fragaria vesca subsp. vesca]
11 Hb_108802_010 0.150694498 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
12 Hb_001486_130 0.1539714798 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
13 Hb_000395_030 0.1542971272 - - oligopeptide transporter, putative [Ricinus communis]
14 Hb_001514_100 0.1558035704 - - PREDICTED: F-box protein GID2 [Jatropha curcas]
15 Hb_002205_260 0.1574612384 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
16 Hb_000890_190 0.158586116 - - glutaredoxin, grx, putative [Ricinus communis]
17 Hb_005882_020 0.1612286867 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
18 Hb_002294_010 0.163509782 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
19 Hb_055706_010 0.1646762162 - - hypothetical protein JCGZ_22222 [Jatropha curcas]
20 Hb_111985_060 0.1648074398 - - PREDICTED: cytokinin dehydrogenase 5 [Jatropha curcas]

Gene co-expression network

sample Hb_025030_010 Hb_025030_010 Hb_051450_010 Hb_051450_010 Hb_025030_010--Hb_051450_010 Hb_028841_020 Hb_028841_020 Hb_025030_010--Hb_028841_020 Hb_001568_060 Hb_001568_060 Hb_025030_010--Hb_001568_060 Hb_001021_110 Hb_001021_110 Hb_025030_010--Hb_001021_110 Hb_007433_020 Hb_007433_020 Hb_025030_010--Hb_007433_020 Hb_000510_350 Hb_000510_350 Hb_025030_010--Hb_000510_350 Hb_168039_020 Hb_168039_020 Hb_051450_010--Hb_168039_020 Hb_051450_010--Hb_000510_350 Hb_000389_250 Hb_000389_250 Hb_051450_010--Hb_000389_250 Hb_000890_190 Hb_000890_190 Hb_051450_010--Hb_000890_190 Hb_002193_050 Hb_002193_050 Hb_051450_010--Hb_002193_050 Hb_028841_020--Hb_001568_060 Hb_108802_010 Hb_108802_010 Hb_028841_020--Hb_108802_010 Hb_000175_250 Hb_000175_250 Hb_028841_020--Hb_000175_250 Hb_039650_030 Hb_039650_030 Hb_028841_020--Hb_039650_030 Hb_028841_020--Hb_007433_020 Hb_001568_060--Hb_007433_020 Hb_001568_060--Hb_108802_010 Hb_005882_020 Hb_005882_020 Hb_001568_060--Hb_005882_020 Hb_000322_120 Hb_000322_120 Hb_001568_060--Hb_000322_120 Hb_004785_120 Hb_004785_120 Hb_001021_110--Hb_004785_120 Hb_000523_060 Hb_000523_060 Hb_001021_110--Hb_000523_060 Hb_000996_200 Hb_000996_200 Hb_001021_110--Hb_000996_200 Hb_005545_090 Hb_005545_090 Hb_001021_110--Hb_005545_090 Hb_002481_070 Hb_002481_070 Hb_001021_110--Hb_002481_070 Hb_008667_020 Hb_008667_020 Hb_007433_020--Hb_008667_020 Hb_021596_070 Hb_021596_070 Hb_007433_020--Hb_021596_070 Hb_019961_010 Hb_019961_010 Hb_007433_020--Hb_019961_010 Hb_001411_150 Hb_001411_150 Hb_007433_020--Hb_001411_150 Hb_011054_030 Hb_011054_030 Hb_007433_020--Hb_011054_030 Hb_111985_060 Hb_111985_060 Hb_007433_020--Hb_111985_060 Hb_000510_350--Hb_000890_190 Hb_000510_350--Hb_168039_020 Hb_003683_090 Hb_003683_090 Hb_000510_350--Hb_003683_090 Hb_012553_010 Hb_012553_010 Hb_000510_350--Hb_012553_010 Hb_124207_010 Hb_124207_010 Hb_000510_350--Hb_124207_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0555598 64.4368 12.7965 1.75784 0.108268 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 9.48946 0.958407

CAGE analysis