Hb_028841_020

Information

Type -
Description -
Location Contig28841: 10964-23110
Sequence    

Annotation

kegg
ID sly:101261691
description G-type lectin S-receptor-like serine/threonine-protein kinase CES101
nr
ID KDO56869.1
description hypothetical protein CISIN_1g041345mg [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A067ENW0
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041345mg PE=4 SV=1
Gene Ontology
ID GO:0004672
description g-type lectin s-receptor-like serine threonine-protein kinase ces101

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30097: 22289-22855 , PASA_asmbl_30098: 8805-23123
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028841_020 0.0 - - hypothetical protein CISIN_1g041345mg [Citrus sinensis]
2 Hb_001568_060 0.0972322437 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
3 Hb_108802_010 0.1073883257 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
4 Hb_025030_010 0.1134923195 - - -
5 Hb_000175_250 0.1284696403 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
6 Hb_039650_030 0.1460435763 - - hypothetical protein RCOM_2128750 [Ricinus communis]
7 Hb_007433_020 0.1469710214 - - hypothetical protein VITISV_005320 [Vitis vinifera]
8 Hb_004924_030 0.1513401414 - - -
9 Hb_051450_010 0.1577720433 - - conserved hypothetical protein [Ricinus communis]
10 Hb_175087_010 0.1611057648 - - hypothetical protein POPTR_0011s16980g, partial [Populus trichocarpa]
11 Hb_000395_030 0.1651985982 - - oligopeptide transporter, putative [Ricinus communis]
12 Hb_003119_030 0.1660627278 - - PREDICTED: classical arabinogalactan protein 1-like [Jatropha curcas]
13 Hb_008667_020 0.1700266286 - - PREDICTED: uncharacterized protein LOC101299609 [Fragaria vesca subsp. vesca]
14 Hb_001021_110 0.170178387 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
15 Hb_000522_120 0.1712723217 - - hypothetical protein POPTR_0008s16470g [Populus trichocarpa]
16 Hb_007328_010 0.1733754696 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
17 Hb_168039_020 0.1738132827 - - -
18 Hb_012545_080 0.1824471641 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
19 Hb_000322_120 0.1825653738 - - PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
20 Hb_002205_260 0.1829441789 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]

Gene co-expression network

sample Hb_028841_020 Hb_028841_020 Hb_001568_060 Hb_001568_060 Hb_028841_020--Hb_001568_060 Hb_108802_010 Hb_108802_010 Hb_028841_020--Hb_108802_010 Hb_025030_010 Hb_025030_010 Hb_028841_020--Hb_025030_010 Hb_000175_250 Hb_000175_250 Hb_028841_020--Hb_000175_250 Hb_039650_030 Hb_039650_030 Hb_028841_020--Hb_039650_030 Hb_007433_020 Hb_007433_020 Hb_028841_020--Hb_007433_020 Hb_001568_060--Hb_025030_010 Hb_001568_060--Hb_007433_020 Hb_001568_060--Hb_108802_010 Hb_005882_020 Hb_005882_020 Hb_001568_060--Hb_005882_020 Hb_000322_120 Hb_000322_120 Hb_001568_060--Hb_000322_120 Hb_003119_030 Hb_003119_030 Hb_108802_010--Hb_003119_030 Hb_108802_010--Hb_025030_010 Hb_175087_010 Hb_175087_010 Hb_108802_010--Hb_175087_010 Hb_001021_110 Hb_001021_110 Hb_108802_010--Hb_001021_110 Hb_051450_010 Hb_051450_010 Hb_025030_010--Hb_051450_010 Hb_025030_010--Hb_001021_110 Hb_025030_010--Hb_007433_020 Hb_000510_350 Hb_000510_350 Hb_025030_010--Hb_000510_350 Hb_000175_250--Hb_039650_030 Hb_004924_030 Hb_004924_030 Hb_000175_250--Hb_004924_030 Hb_007328_010 Hb_007328_010 Hb_000175_250--Hb_007328_010 Hb_012496_010 Hb_012496_010 Hb_000175_250--Hb_012496_010 Hb_141990_050 Hb_141990_050 Hb_000175_250--Hb_141990_050 Hb_039650_030--Hb_004924_030 Hb_000247_150 Hb_000247_150 Hb_039650_030--Hb_000247_150 Hb_006873_030 Hb_006873_030 Hb_039650_030--Hb_006873_030 Hb_035677_010 Hb_035677_010 Hb_039650_030--Hb_035677_010 Hb_039650_030--Hb_007328_010 Hb_008667_020 Hb_008667_020 Hb_007433_020--Hb_008667_020 Hb_021596_070 Hb_021596_070 Hb_007433_020--Hb_021596_070 Hb_019961_010 Hb_019961_010 Hb_007433_020--Hb_019961_010 Hb_001411_150 Hb_001411_150 Hb_007433_020--Hb_001411_150 Hb_011054_030 Hb_011054_030 Hb_007433_020--Hb_011054_030 Hb_111985_060 Hb_111985_060 Hb_007433_020--Hb_111985_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.08287 0.836403 0.0939261 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.259219 0.148906

CAGE analysis