Hb_001832_240

Information

Type -
Description -
Location Contig1832: 241534-242720
Sequence    

Annotation

kegg
ID rcu:RCOM_1046730
description ectonucleotide pyrophosphatase/phosphodiesterase, putative (EC:3.1.4.1)
nr
ID XP_012076912.1
description PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
swissprot
ID O14638
description Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 OS=Homo sapiens GN=ENPP3 PE=1 SV=2
trembl
ID A0A067KNG8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07396 PE=4 SV=1
Gene Ontology
ID GO:0003824
description ectonucleotide pyrophosphatase phosphodiesterase family member 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17916: 227224-243295
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001832_240 0.0 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
2 Hb_008080_030 0.104548833 - - hypothetical protein POPTR_0275s002101g, partial [Populus trichocarpa]
3 Hb_005628_050 0.1049719822 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
4 Hb_002871_050 0.1064182971 transcription factor TF Family: ARF auxin response factor 1 family protein [Populus trichocarpa]
5 Hb_000046_590 0.114696405 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
6 Hb_001454_290 0.1357900669 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
7 Hb_003881_020 0.1366794457 - - PREDICTED: stellacyanin-like [Jatropha curcas]
8 Hb_002110_060 0.1375026107 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
9 Hb_187991_010 0.1401910101 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
10 Hb_001318_110 0.1461256083 - - PREDICTED: uncharacterized protein LOC105642677 [Jatropha curcas]
11 Hb_000482_070 0.148309851 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
12 Hb_000001_010 0.1491664272 - - PREDICTED: uncharacterized protein LOC105648961 [Jatropha curcas]
13 Hb_004703_010 0.1510678902 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
14 Hb_005679_110 0.1511908795 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
15 Hb_166009_010 0.1512415202 - - carbonyl reductase, putative [Ricinus communis]
16 Hb_000567_060 0.153531748 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
17 Hb_000382_030 0.1556063517 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
18 Hb_006262_030 0.1579902499 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
19 Hb_008554_090 0.1582387887 - - zinc finger protein, putative [Ricinus communis]
20 Hb_000501_110 0.1593776247 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Populus euphratica]

Gene co-expression network

sample Hb_001832_240 Hb_001832_240 Hb_008080_030 Hb_008080_030 Hb_001832_240--Hb_008080_030 Hb_005628_050 Hb_005628_050 Hb_001832_240--Hb_005628_050 Hb_002871_050 Hb_002871_050 Hb_001832_240--Hb_002871_050 Hb_000046_590 Hb_000046_590 Hb_001832_240--Hb_000046_590 Hb_001454_290 Hb_001454_290 Hb_001832_240--Hb_001454_290 Hb_003881_020 Hb_003881_020 Hb_001832_240--Hb_003881_020 Hb_002157_100 Hb_002157_100 Hb_008080_030--Hb_002157_100 Hb_008080_030--Hb_000046_590 Hb_042098_010 Hb_042098_010 Hb_008080_030--Hb_042098_010 Hb_004703_010 Hb_004703_010 Hb_008080_030--Hb_004703_010 Hb_003413_020 Hb_003413_020 Hb_008080_030--Hb_003413_020 Hb_000031_160 Hb_000031_160 Hb_005628_050--Hb_000031_160 Hb_000382_030 Hb_000382_030 Hb_005628_050--Hb_000382_030 Hb_001377_130 Hb_001377_130 Hb_005628_050--Hb_001377_130 Hb_000598_020 Hb_000598_020 Hb_005628_050--Hb_000598_020 Hb_000417_120 Hb_000417_120 Hb_005628_050--Hb_000417_120 Hb_000482_070 Hb_000482_070 Hb_002871_050--Hb_000482_070 Hb_005679_110 Hb_005679_110 Hb_002871_050--Hb_005679_110 Hb_000567_060 Hb_000567_060 Hb_002871_050--Hb_000567_060 Hb_000018_090 Hb_000018_090 Hb_002871_050--Hb_000018_090 Hb_002871_050--Hb_003881_020 Hb_008215_010 Hb_008215_010 Hb_000046_590--Hb_008215_010 Hb_000046_590--Hb_000598_020 Hb_007765_140 Hb_007765_140 Hb_000046_590--Hb_007765_140 Hb_187991_010 Hb_187991_010 Hb_000046_590--Hb_187991_010 Hb_001454_290--Hb_002871_050 Hb_001454_290--Hb_005679_110 Hb_001345_020 Hb_001345_020 Hb_001454_290--Hb_001345_020 Hb_005730_070 Hb_005730_070 Hb_001454_290--Hb_005730_070 Hb_002110_060 Hb_002110_060 Hb_001454_290--Hb_002110_060 Hb_000723_050 Hb_000723_050 Hb_001454_290--Hb_000723_050 Hb_137272_010 Hb_137272_010 Hb_003881_020--Hb_137272_010 Hb_083412_010 Hb_083412_010 Hb_003881_020--Hb_083412_010 Hb_003881_020--Hb_000567_060 Hb_003881_020--Hb_000482_070 Hb_000501_110 Hb_000501_110 Hb_003881_020--Hb_000501_110 Hb_002984_040 Hb_002984_040 Hb_003881_020--Hb_002984_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.128731 7.03354 9.33594 4.31444 0.0557036 0.143315
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 8.22483 1.24718

CAGE analysis