Hb_000723_050

Information

Type -
Description -
Location Contig723: 63600-68742
Sequence    

Annotation

kegg
ID rcu:RCOM_1354900
description metal ion binding protein, putative
nr
ID XP_012082425.1
description PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
swissprot
ID Q9SZN7
description Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
trembl
ID A0A067K287
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16552 PE=4 SV=1
Gene Ontology
ID GO:0046872
description metal ion binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55749: 67145-68802
cDNA
(Sanger)
(ID:Location)		 040_H02.ab1: 67145-67601

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000723_050 0.0 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
2 Hb_000340_350 0.1085104062 - - PREDICTED: sugar transporter ERD6-like 7 isoform X1 [Jatropha curcas]
3 Hb_005730_070 0.1233461539 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
4 Hb_033312_050 0.12355286 - - PREDICTED: uncharacterized protein LOC105638598, partial [Jatropha curcas]
5 Hb_001454_290 0.1289876889 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
6 Hb_004551_050 0.1364859078 - - PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic [Jatropha curcas]
7 Hb_008554_090 0.1421570658 - - zinc finger protein, putative [Ricinus communis]
8 Hb_002110_060 0.1424584267 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
9 Hb_000501_110 0.1502733419 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Populus euphratica]
10 Hb_001532_060 0.1521480931 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
11 Hb_002304_190 0.154225138 - - PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Jatropha curcas]
12 Hb_002984_040 0.1584191289 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_022092_050 0.1590610085 - - PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica]
14 Hb_001300_180 0.1602538031 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
15 Hb_004703_010 0.1621942152 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
16 Hb_006262_030 0.1628904811 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
17 Hb_002003_030 0.1644560987 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
18 Hb_003881_020 0.1679322202 - - PREDICTED: stellacyanin-like [Jatropha curcas]
19 Hb_001349_020 0.1681002079 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
20 Hb_002960_010 0.1687216739 - - Zeamatin precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000723_050 Hb_000723_050 Hb_000340_350 Hb_000340_350 Hb_000723_050--Hb_000340_350 Hb_005730_070 Hb_005730_070 Hb_000723_050--Hb_005730_070 Hb_033312_050 Hb_033312_050 Hb_000723_050--Hb_033312_050 Hb_001454_290 Hb_001454_290 Hb_000723_050--Hb_001454_290 Hb_004551_050 Hb_004551_050 Hb_000723_050--Hb_004551_050 Hb_008554_090 Hb_008554_090 Hb_000723_050--Hb_008554_090 Hb_000340_350--Hb_033312_050 Hb_000760_080 Hb_000760_080 Hb_000340_350--Hb_000760_080 Hb_001634_030 Hb_001634_030 Hb_000340_350--Hb_001634_030 Hb_001300_180 Hb_001300_180 Hb_000340_350--Hb_001300_180 Hb_134174_010 Hb_134174_010 Hb_000340_350--Hb_134174_010 Hb_001349_020 Hb_001349_020 Hb_005730_070--Hb_001349_020 Hb_005730_070--Hb_008554_090 Hb_000057_180 Hb_000057_180 Hb_005730_070--Hb_000057_180 Hb_000017_320 Hb_000017_320 Hb_005730_070--Hb_000017_320 Hb_002304_190 Hb_002304_190 Hb_005730_070--Hb_002304_190 Hb_002003_010 Hb_002003_010 Hb_005730_070--Hb_002003_010 Hb_033312_050--Hb_002304_190 Hb_033312_050--Hb_000760_080 Hb_033312_050--Hb_001349_020 Hb_001832_110 Hb_001832_110 Hb_033312_050--Hb_001832_110 Hb_033312_050--Hb_005730_070 Hb_033312_050--Hb_000017_320 Hb_002871_050 Hb_002871_050 Hb_001454_290--Hb_002871_050 Hb_005679_110 Hb_005679_110 Hb_001454_290--Hb_005679_110 Hb_001345_020 Hb_001345_020 Hb_001454_290--Hb_001345_020 Hb_001454_290--Hb_005730_070 Hb_002110_060 Hb_002110_060 Hb_001454_290--Hb_002110_060 Hb_004551_050--Hb_001634_030 Hb_005332_010 Hb_005332_010 Hb_004551_050--Hb_005332_010 Hb_022092_050 Hb_022092_050 Hb_004551_050--Hb_022092_050 Hb_000567_060 Hb_000567_060 Hb_004551_050--Hb_000567_060 Hb_004525_110 Hb_004525_110 Hb_004551_050--Hb_004525_110 Hb_008554_090--Hb_002110_060 Hb_009070_030 Hb_009070_030 Hb_008554_090--Hb_009070_030 Hb_008554_090--Hb_004525_110 Hb_150730_010 Hb_150730_010 Hb_008554_090--Hb_150730_010 Hb_042083_060 Hb_042083_060 Hb_008554_090--Hb_042083_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.61326 225.7 554.367 180.872 0.796335 0.191273
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.2042 25.6202 11.5245 651.03 105.028

CAGE analysis