Hb_005679_110

Information

Type -
Description -
Location Contig5679: 310519-312759
Sequence    

Annotation

kegg
ID rcu:RCOM_0284060
description hypothetical protein
nr
ID XP_012077797.1
description PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LB29
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17278 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005679_110 0.0 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
2 Hb_002871_050 0.0781527513 transcription factor TF Family: ARF auxin response factor 1 family protein [Populus trichocarpa]
3 Hb_001349_020 0.0783082162 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
4 Hb_000696_030 0.0976314167 - - PREDICTED: uncharacterized protein LOC105647085 isoform X1 [Jatropha curcas]
5 Hb_001776_070 0.0994324576 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
6 Hb_000482_070 0.1079130904 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
7 Hb_001345_020 0.1081306235 - - hypothetical protein POPTR_0007s10400g [Populus trichocarpa]
8 Hb_000567_060 0.115513809 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
9 Hb_000096_210 0.1195749007 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
10 Hb_003881_020 0.1198904352 - - PREDICTED: stellacyanin-like [Jatropha curcas]
11 Hb_010164_020 0.1201544086 - - PREDICTED: abscisate beta-glucosyltransferase-like [Jatropha curcas]
12 Hb_014250_010 0.1230280352 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
13 Hb_001454_290 0.1247161098 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
14 Hb_001638_150 0.1247440606 - - acyltransferase, putative [Ricinus communis]
15 Hb_005766_010 0.1261352693 - - serine carboxypeptidase, putative [Ricinus communis]
16 Hb_001157_190 0.1297955311 - - PREDICTED: protein YLS3 [Jatropha curcas]
17 Hb_000696_250 0.1341719711 - - PREDICTED: patellin-6 [Jatropha curcas]
18 Hb_022092_050 0.1353974075 - - PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica]
19 Hb_033312_050 0.1378039206 - - PREDICTED: uncharacterized protein LOC105638598, partial [Jatropha curcas]
20 Hb_004525_110 0.1390093897 - - hypothetical protein POPTR_0007s12850g [Populus trichocarpa]

Gene co-expression network

sample Hb_005679_110 Hb_005679_110 Hb_002871_050 Hb_002871_050 Hb_005679_110--Hb_002871_050 Hb_001349_020 Hb_001349_020 Hb_005679_110--Hb_001349_020 Hb_000696_030 Hb_000696_030 Hb_005679_110--Hb_000696_030 Hb_001776_070 Hb_001776_070 Hb_005679_110--Hb_001776_070 Hb_000482_070 Hb_000482_070 Hb_005679_110--Hb_000482_070 Hb_001345_020 Hb_001345_020 Hb_005679_110--Hb_001345_020 Hb_002871_050--Hb_000482_070 Hb_000567_060 Hb_000567_060 Hb_002871_050--Hb_000567_060 Hb_000018_090 Hb_000018_090 Hb_002871_050--Hb_000018_090 Hb_001832_240 Hb_001832_240 Hb_002871_050--Hb_001832_240 Hb_003881_020 Hb_003881_020 Hb_002871_050--Hb_003881_020 Hb_001349_020--Hb_001345_020 Hb_000017_320 Hb_000017_320 Hb_001349_020--Hb_000017_320 Hb_005730_070 Hb_005730_070 Hb_001349_020--Hb_005730_070 Hb_000696_250 Hb_000696_250 Hb_001349_020--Hb_000696_250 Hb_002003_010 Hb_002003_010 Hb_001349_020--Hb_002003_010 Hb_001157_190 Hb_001157_190 Hb_000696_030--Hb_001157_190 Hb_000696_030--Hb_001776_070 Hb_005839_030 Hb_005839_030 Hb_000696_030--Hb_005839_030 Hb_001195_740 Hb_001195_740 Hb_000696_030--Hb_001195_740 Hb_005144_080 Hb_005144_080 Hb_000696_030--Hb_005144_080 Hb_010164_020 Hb_010164_020 Hb_001776_070--Hb_010164_020 Hb_027556_060 Hb_027556_060 Hb_001776_070--Hb_027556_060 Hb_001776_070--Hb_001349_020 Hb_001776_070--Hb_005144_080 Hb_000482_070--Hb_000018_090 Hb_007747_160 Hb_007747_160 Hb_000482_070--Hb_007747_160 Hb_000482_070--Hb_003881_020 Hb_000482_070--Hb_000567_060 Hb_014250_010 Hb_014250_010 Hb_001345_020--Hb_014250_010 Hb_002503_050 Hb_002503_050 Hb_001345_020--Hb_002503_050 Hb_001638_150 Hb_001638_150 Hb_001345_020--Hb_001638_150 Hb_001345_020--Hb_000567_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0363771 0.783016 1.81194 1.35563 0.0146511 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.63388 0.437727

CAGE analysis