Hb_007747_160

Information

Type -
Description -
Location Contig7747: 126799-132610
Sequence    

Annotation

kegg
ID rcu:RCOM_1258640
description lysosomal pro-X carboxypeptidase, putative (EC:3.4.16.2)
nr
ID XP_002530520.1
description lysosomal pro-X carboxypeptidase, putative [Ricinus communis]
swissprot
ID Q2TA14
description Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1
trembl
ID B9SX01
description Lysosomal pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_1258640 PE=4 SV=1
Gene Ontology
ID GO:0004180
description lysosomal pro-x carboxypeptidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57750: 132381-132591
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007747_160 0.0 - - lysosomal pro-X carboxypeptidase, putative [Ricinus communis]
2 Hb_000482_070 0.1005944556 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
3 Hb_009476_070 0.1221622181 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
4 Hb_008806_040 0.1256320277 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
5 Hb_000018_090 0.1266455953 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_004117_280 0.1415511961 - - hypothetical protein JCGZ_00361 [Jatropha curcas]
7 Hb_002774_180 0.1439895867 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
8 Hb_009907_020 0.1474794374 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
9 Hb_001776_130 0.1482378613 - - metallothionein [Hevea brasiliensis]
10 Hb_000365_180 0.1502810028 - - PREDICTED: protein LURP-one-related 8-like [Pyrus x bretschneideri]
11 Hb_002871_050 0.1511875665 transcription factor TF Family: ARF auxin response factor 1 family protein [Populus trichocarpa]
12 Hb_000024_150 0.1517250039 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
13 Hb_000163_180 0.1526449285 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
14 Hb_006120_210 0.1529520476 - - gibberellin 20-oxidase, putative [Ricinus communis]
15 Hb_000010_440 0.1545113362 - - PREDICTED: peroxisome biogenesis factor 10-like [Jatropha curcas]
16 Hb_008749_010 0.154571494 - - PREDICTED: auxin efflux carrier component 3-like [Jatropha curcas]
17 Hb_000914_140 0.1546268418 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
18 Hb_003747_250 0.1580883134 - - PREDICTED: potassium transporter 7 isoform X2 [Elaeis guineensis]
19 Hb_002817_030 0.1605742497 - - hypothetical protein POPTR_0001s39195g [Populus trichocarpa]
20 Hb_001989_040 0.1606215831 - - PREDICTED: neurofilament heavy polypeptide [Jatropha curcas]

Gene co-expression network

sample Hb_007747_160 Hb_007747_160 Hb_000482_070 Hb_000482_070 Hb_007747_160--Hb_000482_070 Hb_009476_070 Hb_009476_070 Hb_007747_160--Hb_009476_070 Hb_008806_040 Hb_008806_040 Hb_007747_160--Hb_008806_040 Hb_000018_090 Hb_000018_090 Hb_007747_160--Hb_000018_090 Hb_004117_280 Hb_004117_280 Hb_007747_160--Hb_004117_280 Hb_002774_180 Hb_002774_180 Hb_007747_160--Hb_002774_180 Hb_000482_070--Hb_000018_090 Hb_002871_050 Hb_002871_050 Hb_000482_070--Hb_002871_050 Hb_003881_020 Hb_003881_020 Hb_000482_070--Hb_003881_020 Hb_000567_060 Hb_000567_060 Hb_000482_070--Hb_000567_060 Hb_005679_110 Hb_005679_110 Hb_000482_070--Hb_005679_110 Hb_000365_180 Hb_000365_180 Hb_009476_070--Hb_000365_180 Hb_138086_010 Hb_138086_010 Hb_009476_070--Hb_138086_010 Hb_009476_070--Hb_008806_040 Hb_008749_010 Hb_008749_010 Hb_009476_070--Hb_008749_010 Hb_009476_070--Hb_002774_180 Hb_005463_070 Hb_005463_070 Hb_009476_070--Hb_005463_070 Hb_003747_250 Hb_003747_250 Hb_008806_040--Hb_003747_250 Hb_008806_040--Hb_138086_010 Hb_070634_010 Hb_070634_010 Hb_008806_040--Hb_070634_010 Hb_008806_040--Hb_002774_180 Hb_001989_040 Hb_001989_040 Hb_008806_040--Hb_001989_040 Hb_000018_090--Hb_000567_060 Hb_000018_090--Hb_002871_050 Hb_000018_090--Hb_002774_180 Hb_137272_010 Hb_137272_010 Hb_000018_090--Hb_137272_010 Hb_001776_130 Hb_001776_130 Hb_000018_090--Hb_001776_130 Hb_004611_050 Hb_004611_050 Hb_004117_280--Hb_004611_050 Hb_003092_020 Hb_003092_020 Hb_004117_280--Hb_003092_020 Hb_002817_030 Hb_002817_030 Hb_004117_280--Hb_002817_030 Hb_002490_060 Hb_002490_060 Hb_004117_280--Hb_002490_060 Hb_000627_040 Hb_000627_040 Hb_004117_280--Hb_000627_040 Hb_000163_180 Hb_000163_180 Hb_004117_280--Hb_000163_180 Hb_002973_070 Hb_002973_070 Hb_002774_180--Hb_002973_070 Hb_001141_210 Hb_001141_210 Hb_002774_180--Hb_001141_210 Hb_000771_040 Hb_000771_040 Hb_002774_180--Hb_000771_040 Hb_004785_160 Hb_004785_160 Hb_002774_180--Hb_004785_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.189898 0.41501 0.28522 0.0219326 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.150375 0.088194

CAGE analysis