Hb_000018_090

Information

Type -
Description -
Location Contig18: 94922-98312
Sequence    

Annotation

kegg
ID rcu:RCOM_0801630
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002516533.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID P47735
description Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1
trembl
ID B9RS14
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0801630 PE=4 SV=1
Gene Ontology
ID GO:0005622
description receptor-like protein kinase hsl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17414: 95139-95996 , PASA_asmbl_17418: 97110-98278
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000018_090 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000482_070 0.0658058395 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
3 Hb_000567_060 0.089457844 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
4 Hb_002871_050 0.0980454811 transcription factor TF Family: ARF auxin response factor 1 family protein [Populus trichocarpa]
5 Hb_002774_180 0.1031437364 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
6 Hb_137272_010 0.1053581889 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
7 Hb_001776_130 0.1083776579 - - metallothionein [Hevea brasiliensis]
8 Hb_003881_020 0.1201336529 - - PREDICTED: stellacyanin-like [Jatropha curcas]
9 Hb_007747_160 0.1266455953 - - lysosomal pro-X carboxypeptidase, putative [Ricinus communis]
10 Hb_009476_070 0.1333107553 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
11 Hb_002995_010 0.1369795334 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
12 Hb_004117_280 0.139733317 - - hypothetical protein JCGZ_00361 [Jatropha curcas]
13 Hb_005834_050 0.1404095228 - - PREDICTED: cationic amino acid transporter 1-like [Jatropha curcas]
14 Hb_005679_110 0.1434903123 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
15 Hb_003759_040 0.1437444111 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
16 Hb_000731_280 0.1439624513 - - PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
17 Hb_008806_040 0.1441709043 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
18 Hb_005542_030 0.1448091697 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 70 isoform X2 [Jatropha curcas]
19 Hb_001989_040 0.1455021484 - - PREDICTED: neurofilament heavy polypeptide [Jatropha curcas]
20 Hb_000771_040 0.1470152518 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000018_090 Hb_000018_090 Hb_000482_070 Hb_000482_070 Hb_000018_090--Hb_000482_070 Hb_000567_060 Hb_000567_060 Hb_000018_090--Hb_000567_060 Hb_002871_050 Hb_002871_050 Hb_000018_090--Hb_002871_050 Hb_002774_180 Hb_002774_180 Hb_000018_090--Hb_002774_180 Hb_137272_010 Hb_137272_010 Hb_000018_090--Hb_137272_010 Hb_001776_130 Hb_001776_130 Hb_000018_090--Hb_001776_130 Hb_000482_070--Hb_002871_050 Hb_007747_160 Hb_007747_160 Hb_000482_070--Hb_007747_160 Hb_003881_020 Hb_003881_020 Hb_000482_070--Hb_003881_020 Hb_000482_070--Hb_000567_060 Hb_005679_110 Hb_005679_110 Hb_000482_070--Hb_005679_110 Hb_000567_060--Hb_003881_020 Hb_000567_060--Hb_002871_050 Hb_000567_060--Hb_137272_010 Hb_001345_020 Hb_001345_020 Hb_000567_060--Hb_001345_020 Hb_002871_050--Hb_005679_110 Hb_001832_240 Hb_001832_240 Hb_002871_050--Hb_001832_240 Hb_002871_050--Hb_003881_020 Hb_002973_070 Hb_002973_070 Hb_002774_180--Hb_002973_070 Hb_001141_210 Hb_001141_210 Hb_002774_180--Hb_001141_210 Hb_000771_040 Hb_000771_040 Hb_002774_180--Hb_000771_040 Hb_009476_070 Hb_009476_070 Hb_002774_180--Hb_009476_070 Hb_004785_160 Hb_004785_160 Hb_002774_180--Hb_004785_160 Hb_137272_010--Hb_003881_020 Hb_006266_010 Hb_006266_010 Hb_137272_010--Hb_006266_010 Hb_137272_010--Hb_000482_070 Hb_000189_160 Hb_000189_160 Hb_137272_010--Hb_000189_160 Hb_002995_010 Hb_002995_010 Hb_001776_130--Hb_002995_010 Hb_005834_050 Hb_005834_050 Hb_001776_130--Hb_005834_050 Hb_003759_040 Hb_003759_040 Hb_001776_130--Hb_003759_040 Hb_003688_220 Hb_003688_220 Hb_001776_130--Hb_003688_220 Hb_009907_020 Hb_009907_020 Hb_001776_130--Hb_009907_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0292158 15.3499 37.6575 17.5746 0.00584786 0.0575454
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0132454 0.0312701 0.0598993 15.8759 6.63725

CAGE analysis