Hb_003759_040

Information

Type -
Description -
Location Contig3759: 32939-34686
Sequence    

Annotation

kegg
ID rcu:RCOM_1158010
description aldo-keto reductase, putative (EC:1.1.1.21)
nr
ID XP_012088004.1
description PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
swissprot
ID Q0PGJ6
description Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1
trembl
ID A0A067JKP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25120 PE=4 SV=1
Gene Ontology
ID GO:0016491
description aldo-keto reductase family 4 member c9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38346: 32976-33256 , PASA_asmbl_38347: 33831-34534 , PASA_asmbl_38348: 33423-33937
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003759_040 0.0 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
2 Hb_007120_130 0.0958038222 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001776_130 0.111459223 - - metallothionein [Hevea brasiliensis]
4 Hb_005834_050 0.1122271795 - - PREDICTED: cationic amino acid transporter 1-like [Jatropha curcas]
5 Hb_028487_040 0.1227624631 - - hypothetical protein POPTR_0010s11910g [Populus trichocarpa]
6 Hb_002995_010 0.1235684603 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
7 Hb_000914_140 0.1248046283 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
8 Hb_003688_220 0.141887156 - - unknown [Populus trichocarpa]
9 Hb_137272_010 0.1436180716 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
10 Hb_000018_090 0.1437444111 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_006789_030 0.1458349028 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
12 Hb_004611_050 0.1462004646 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]
13 Hb_006615_220 0.1493389242 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM1 isoform X2 [Jatropha curcas]
14 Hb_007576_130 0.150379767 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
15 Hb_004117_280 0.1506269031 - - hypothetical protein JCGZ_00361 [Jatropha curcas]
16 Hb_001918_030 0.1510958397 - - -
17 Hb_000020_020 0.1524900652 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
18 Hb_009907_020 0.1536715635 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
19 Hb_004567_070 0.1543089208 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001634_030 0.1543699535 - - Receptor like protein 1, putative [Theobroma cacao]

Gene co-expression network

sample Hb_003759_040 Hb_003759_040 Hb_007120_130 Hb_007120_130 Hb_003759_040--Hb_007120_130 Hb_001776_130 Hb_001776_130 Hb_003759_040--Hb_001776_130 Hb_005834_050 Hb_005834_050 Hb_003759_040--Hb_005834_050 Hb_028487_040 Hb_028487_040 Hb_003759_040--Hb_028487_040 Hb_002995_010 Hb_002995_010 Hb_003759_040--Hb_002995_010 Hb_000914_140 Hb_000914_140 Hb_003759_040--Hb_000914_140 Hb_007576_130 Hb_007576_130 Hb_007120_130--Hb_007576_130 Hb_006789_030 Hb_006789_030 Hb_007120_130--Hb_006789_030 Hb_000020_020 Hb_000020_020 Hb_007120_130--Hb_000020_020 Hb_000185_170 Hb_000185_170 Hb_007120_130--Hb_000185_170 Hb_005486_020 Hb_005486_020 Hb_007120_130--Hb_005486_020 Hb_000018_090 Hb_000018_090 Hb_001776_130--Hb_000018_090 Hb_001776_130--Hb_002995_010 Hb_001776_130--Hb_005834_050 Hb_003688_220 Hb_003688_220 Hb_001776_130--Hb_003688_220 Hb_009907_020 Hb_009907_020 Hb_001776_130--Hb_009907_020 Hb_005834_050--Hb_002995_010 Hb_012691_010 Hb_012691_010 Hb_005834_050--Hb_012691_010 Hb_000035_150 Hb_000035_150 Hb_005834_050--Hb_000035_150 Hb_006615_220 Hb_006615_220 Hb_005834_050--Hb_006615_220 Hb_002596_090 Hb_002596_090 Hb_028487_040--Hb_002596_090 Hb_028487_040--Hb_003688_220 Hb_000152_410 Hb_000152_410 Hb_028487_040--Hb_000152_410 Hb_028487_040--Hb_005486_020 Hb_001769_120 Hb_001769_120 Hb_028487_040--Hb_001769_120 Hb_002311_500 Hb_002311_500 Hb_002995_010--Hb_002311_500 Hb_002995_010--Hb_000035_150 Hb_002817_030 Hb_002817_030 Hb_002995_010--Hb_002817_030 Hb_004567_070 Hb_004567_070 Hb_002995_010--Hb_004567_070 Hb_003573_050 Hb_003573_050 Hb_000914_140--Hb_003573_050 Hb_000914_140--Hb_002817_030 Hb_001828_110 Hb_001828_110 Hb_000914_140--Hb_001828_110 Hb_000914_140--Hb_002311_500 Hb_002053_180 Hb_002053_180 Hb_000914_140--Hb_002053_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.19859 19.5412 6.09337 0 0.0285924
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.631027 0.0823926 4.57946 5.125

CAGE analysis