Hb_002053_180

Information

Type -
Description -
Location Contig2053: 221264-224324
Sequence    

Annotation

kegg
ID rcu:RCOM_0825430
description Nodulation receptor kinase precursor, putative (EC:2.7.11.26)
nr
ID XP_012078693.1
description PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
swissprot
ID O48788
description Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1
trembl
ID A0A067K7Y1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13261 PE=4 SV=1
Gene Ontology
ID GO:0005886
description probable inactive receptor kinase at2g26730

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21187: 221237-224965
cDNA
(Sanger)
(ID:Location)		 002_G13.ab1: 221237-222028 , 051_L02.ab1: 221237-221999

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002053_180 0.0 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
2 Hb_000199_040 0.0704409126 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
3 Hb_000627_040 0.0802277132 - - leucine-rich repeat protein, putative [Ricinus communis]
4 Hb_007237_020 0.0817151722 - - PREDICTED: protein trichome birefringence-like 23 [Jatropha curcas]
5 Hb_006922_020 0.0841647844 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
6 Hb_000836_090 0.0914267468 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
7 Hb_002490_060 0.0934105519 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
8 Hb_003777_120 0.0952656511 - - -
9 Hb_000002_370 0.0953035155 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
10 Hb_000027_160 0.0976027584 - - PREDICTED: probable protein phosphatase 2C 15 isoform X3 [Jatropha curcas]
11 Hb_003531_050 0.0983244548 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
12 Hb_121313_010 0.0992006691 - - PREDICTED: endoglucanase 24-like [Jatropha curcas]
13 Hb_000086_470 0.0992507845 - - hypothetical protein JCGZ_17645 [Jatropha curcas]
14 Hb_000349_250 0.1031180569 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]
15 Hb_004202_030 0.1034782565 - - PREDICTED: uncharacterized protein LOC103449702 [Malus domestica]
16 Hb_000103_370 0.103550559 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
17 Hb_000905_100 0.1084681334 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
18 Hb_004567_070 0.1105515849 - - conserved hypothetical protein [Ricinus communis]
19 Hb_007123_010 0.111483425 - - PREDICTED: auxin efflux carrier component 3-like [Jatropha curcas]
20 Hb_033006_020 0.1170972947 - - Aspartate aminotransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002053_180 Hb_002053_180 Hb_000199_040 Hb_000199_040 Hb_002053_180--Hb_000199_040 Hb_000627_040 Hb_000627_040 Hb_002053_180--Hb_000627_040 Hb_007237_020 Hb_007237_020 Hb_002053_180--Hb_007237_020 Hb_006922_020 Hb_006922_020 Hb_002053_180--Hb_006922_020 Hb_000836_090 Hb_000836_090 Hb_002053_180--Hb_000836_090 Hb_002490_060 Hb_002490_060 Hb_002053_180--Hb_002490_060 Hb_000002_370 Hb_000002_370 Hb_000199_040--Hb_000002_370 Hb_003777_120 Hb_003777_120 Hb_000199_040--Hb_003777_120 Hb_000199_040--Hb_006922_020 Hb_000878_090 Hb_000878_090 Hb_000199_040--Hb_000878_090 Hb_000199_040--Hb_002490_060 Hb_000627_040--Hb_002490_060 Hb_000627_040--Hb_007237_020 Hb_121313_010 Hb_121313_010 Hb_000627_040--Hb_121313_010 Hb_005730_110 Hb_005730_110 Hb_000627_040--Hb_005730_110 Hb_000627_040--Hb_006922_020 Hb_000086_470 Hb_000086_470 Hb_007237_020--Hb_000086_470 Hb_007237_020--Hb_002490_060 Hb_002817_030 Hb_002817_030 Hb_007237_020--Hb_002817_030 Hb_000120_340 Hb_000120_340 Hb_007237_020--Hb_000120_340 Hb_007123_010 Hb_007123_010 Hb_006922_020--Hb_007123_010 Hb_006922_020--Hb_002490_060 Hb_000103_370 Hb_000103_370 Hb_006922_020--Hb_000103_370 Hb_004228_070 Hb_004228_070 Hb_006922_020--Hb_004228_070 Hb_033006_020 Hb_033006_020 Hb_000836_090--Hb_033006_020 Hb_007130_020 Hb_007130_020 Hb_000836_090--Hb_007130_020 Hb_000905_100 Hb_000905_100 Hb_000836_090--Hb_000905_100 Hb_000836_090--Hb_000002_370 Hb_000836_090--Hb_000199_040 Hb_001366_290 Hb_001366_290 Hb_002490_060--Hb_001366_290 Hb_006196_030 Hb_006196_030 Hb_002490_060--Hb_006196_030 Hb_002490_060--Hb_007123_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.098317 9.52878 35.4352 18.7061 0.0150947 0.0228139
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0915214 0.129629 0.219513 3.45546 13.3079

CAGE analysis