Hb_000002_370

Information

Type -
Description -
Location Contig2: 552300-554114
Sequence    

Annotation

kegg
ID rcu:RCOM_0492410
description hypothetical protein
nr
ID XP_012069793.1
description PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02294 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20104: 551977-552146
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000002_370 0.0 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
2 Hb_000199_040 0.0771105462 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
3 Hb_000103_370 0.0843015415 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
4 Hb_003777_120 0.0903033482 - - -
5 Hb_002053_180 0.0953035155 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
6 Hb_000836_090 0.0964918203 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
7 Hb_004567_070 0.1010492791 - - conserved hypothetical protein [Ricinus communis]
8 Hb_008019_010 0.103350407 - - PREDICTED: nitrile-specifier protein 5-like [Jatropha curcas]
9 Hb_059318_010 0.1037991986 - - glutamate receptor 2 plant, putative [Ricinus communis]
10 Hb_004223_080 0.1044078661 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
11 Hb_004040_010 0.1055558227 - - hypothetical protein POPTR_0019s14250g [Populus trichocarpa]
12 Hb_000878_090 0.1064693533 - - sucrose-phosphatase family protein [Populus trichocarpa]
13 Hb_000905_100 0.1067420787 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like isoform X1 [Jatropha curcas]
14 Hb_000809_130 0.1089564973 - - PREDICTED: peroxidase 10 isoform X3 [Jatropha curcas]
15 Hb_074966_010 0.1138161815 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
16 Hb_011794_050 0.1140211564 - - transcription factor, putative [Ricinus communis]
17 Hb_001366_390 0.1151606712 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
18 Hb_002490_060 0.115689517 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
19 Hb_006922_020 0.1199118486 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
20 Hb_007130_020 0.1209651207 - - -

Gene co-expression network

sample Hb_000002_370 Hb_000002_370 Hb_000199_040 Hb_000199_040 Hb_000002_370--Hb_000199_040 Hb_000103_370 Hb_000103_370 Hb_000002_370--Hb_000103_370 Hb_003777_120 Hb_003777_120 Hb_000002_370--Hb_003777_120 Hb_002053_180 Hb_002053_180 Hb_000002_370--Hb_002053_180 Hb_000836_090 Hb_000836_090 Hb_000002_370--Hb_000836_090 Hb_004567_070 Hb_004567_070 Hb_000002_370--Hb_004567_070 Hb_000199_040--Hb_002053_180 Hb_000199_040--Hb_003777_120 Hb_006922_020 Hb_006922_020 Hb_000199_040--Hb_006922_020 Hb_000878_090 Hb_000878_090 Hb_000199_040--Hb_000878_090 Hb_002490_060 Hb_002490_060 Hb_000199_040--Hb_002490_060 Hb_007123_010 Hb_007123_010 Hb_000103_370--Hb_007123_010 Hb_054926_010 Hb_054926_010 Hb_000103_370--Hb_054926_010 Hb_000103_370--Hb_006922_020 Hb_008019_010 Hb_008019_010 Hb_000103_370--Hb_008019_010 Hb_000809_130 Hb_000809_130 Hb_000103_370--Hb_000809_130 Hb_074966_010 Hb_074966_010 Hb_003777_120--Hb_074966_010 Hb_001926_020 Hb_001926_020 Hb_003777_120--Hb_001926_020 Hb_032731_010 Hb_032731_010 Hb_003777_120--Hb_032731_010 Hb_059318_010 Hb_059318_010 Hb_003777_120--Hb_059318_010 Hb_000627_040 Hb_000627_040 Hb_002053_180--Hb_000627_040 Hb_007237_020 Hb_007237_020 Hb_002053_180--Hb_007237_020 Hb_002053_180--Hb_006922_020 Hb_002053_180--Hb_000836_090 Hb_002053_180--Hb_002490_060 Hb_033006_020 Hb_033006_020 Hb_000836_090--Hb_033006_020 Hb_007130_020 Hb_007130_020 Hb_000836_090--Hb_007130_020 Hb_000905_100 Hb_000905_100 Hb_000836_090--Hb_000905_100 Hb_000836_090--Hb_000199_040 Hb_002311_500 Hb_002311_500 Hb_004567_070--Hb_002311_500 Hb_004567_070--Hb_003777_120 Hb_004567_070--Hb_002053_180 Hb_010407_150 Hb_010407_150 Hb_004567_070--Hb_010407_150 Hb_001571_080 Hb_001571_080 Hb_004567_070--Hb_001571_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0137234 1.99288 5.0635 2.63784 0.0110752 0.0699429
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.370357 1.87609

CAGE analysis