Hb_008019_010

Information

Type -
Description -
Location Contig8019: 10164-11308
Sequence    

Annotation

kegg
ID cic:CICLE_v10015897mg
description hypothetical protein
nr
ID XP_012081497.1
description PREDICTED: nitrile-specifier protein 5-like [Jatropha curcas]
swissprot
ID Q93XW5
description Nitrile-specifier protein 5 OS=Arabidopsis thaliana GN=NSP5 PE=2 SV=1
trembl
ID A0A067K4G6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18512 PE=4 SV=1
Gene Ontology
ID GO:0005515
description nitrile-specifier protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008019_010 0.0 - - PREDICTED: nitrile-specifier protein 5-like [Jatropha curcas]
2 Hb_018134_010 0.0639811424 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ706 isoform X1 [Jatropha curcas]
3 Hb_054926_010 0.0647940983 - - glutamate receptor 2 plant, putative [Ricinus communis]
4 Hb_004040_010 0.0687164127 - - hypothetical protein POPTR_0019s14250g [Populus trichocarpa]
5 Hb_059318_010 0.0860139136 - - glutamate receptor 2 plant, putative [Ricinus communis]
6 Hb_111997_010 0.0919486047 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
7 Hb_000103_370 0.0933392931 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
8 Hb_004553_040 0.1029041242 - - PREDICTED: protein YLS9-like [Jatropha curcas]
9 Hb_007632_230 0.103083247 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-3-like [Jatropha curcas]
10 Hb_000002_370 0.103350407 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]
11 Hb_007123_010 0.1041083387 - - PREDICTED: auxin efflux carrier component 3-like [Jatropha curcas]
12 Hb_008406_060 0.1067866135 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
13 Hb_074966_010 0.1084424409 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
14 Hb_018563_010 0.109446429 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
15 Hb_000199_040 0.1108094272 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
16 Hb_001926_070 0.111013171 - - hypothetical protein JCGZ_21510 [Jatropha curcas]
17 Hb_000319_010 0.1134390951 - - hypothetical protein POPTR_0016s03600g [Populus trichocarpa]
18 Hb_001677_170 0.1139910018 - - hypothetical protein M569_03661, partial [Genlisea aurea]
19 Hb_032731_010 0.1154523689 - - RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
20 Hb_003777_120 0.1165714184 - - -

Gene co-expression network

sample Hb_008019_010 Hb_008019_010 Hb_018134_010 Hb_018134_010 Hb_008019_010--Hb_018134_010 Hb_054926_010 Hb_054926_010 Hb_008019_010--Hb_054926_010 Hb_004040_010 Hb_004040_010 Hb_008019_010--Hb_004040_010 Hb_059318_010 Hb_059318_010 Hb_008019_010--Hb_059318_010 Hb_111997_010 Hb_111997_010 Hb_008019_010--Hb_111997_010 Hb_000103_370 Hb_000103_370 Hb_008019_010--Hb_000103_370 Hb_018134_010--Hb_004040_010 Hb_018134_010--Hb_054926_010 Hb_018134_010--Hb_111997_010 Hb_001677_170 Hb_001677_170 Hb_018134_010--Hb_001677_170 Hb_018134_010--Hb_059318_010 Hb_054926_010--Hb_004040_010 Hb_007632_230 Hb_007632_230 Hb_054926_010--Hb_007632_230 Hb_054926_010--Hb_000103_370 Hb_007123_010 Hb_007123_010 Hb_054926_010--Hb_007123_010 Hb_011794_050 Hb_011794_050 Hb_004040_010--Hb_011794_050 Hb_000319_010 Hb_000319_010 Hb_004040_010--Hb_000319_010 Hb_000878_090 Hb_000878_090 Hb_004040_010--Hb_000878_090 Hb_074966_010 Hb_074966_010 Hb_059318_010--Hb_074966_010 Hb_032731_010 Hb_032731_010 Hb_059318_010--Hb_032731_010 Hb_001926_020 Hb_001926_020 Hb_059318_010--Hb_001926_020 Hb_003777_120 Hb_003777_120 Hb_059318_010--Hb_003777_120 Hb_000049_030 Hb_000049_030 Hb_059318_010--Hb_000049_030 Hb_111997_010--Hb_074966_010 Hb_006188_020 Hb_006188_020 Hb_111997_010--Hb_006188_020 Hb_111997_010--Hb_001677_170 Hb_001606_010 Hb_001606_010 Hb_111997_010--Hb_001606_010 Hb_111997_010--Hb_059318_010 Hb_001926_070 Hb_001926_070 Hb_111997_010--Hb_001926_070 Hb_000103_370--Hb_007123_010 Hb_000002_370 Hb_000002_370 Hb_000103_370--Hb_000002_370 Hb_006922_020 Hb_006922_020 Hb_000103_370--Hb_006922_020 Hb_000809_130 Hb_000809_130 Hb_000103_370--Hb_000809_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.249076 0.48559 0.30975 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0177387 0.268545

CAGE analysis