Hb_007130_020

Information

Type -
Description -
Location Contig7130: 11805-12062
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 030_C05.ab1: 11723-11901

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007130_020 0.0 - - -
2 Hb_044653_050 0.0756212877 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
3 Hb_002311_280 0.088916198 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
4 Hb_000836_090 0.0947747474 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
5 Hb_006922_020 0.102824716 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
6 Hb_033006_020 0.1033212541 - - Aspartate aminotransferase, putative [Ricinus communis]
7 Hb_004228_070 0.1077724777 - - PREDICTED: uncharacterized protein LOC103338699 [Prunus mume]
8 Hb_010812_060 0.1095930714 - - PREDICTED: uncharacterized protein LOC105649158 [Jatropha curcas]
9 Hb_000199_040 0.1101418324 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
10 Hb_007123_010 0.110521287 - - PREDICTED: auxin efflux carrier component 3-like [Jatropha curcas]
11 Hb_000103_370 0.1150736582 - - PREDICTED: protein argonaute 10 [Jatropha curcas]
12 Hb_000049_280 0.1152956036 - - PREDICTED: ribokinase-like isoform X4 [Jatropha curcas]
13 Hb_000260_410 0.1163661345 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
14 Hb_000567_330 0.1169294616 - - PREDICTED: probable metal-nicotianamine transporter YSL7 [Jatropha curcas]
15 Hb_003266_090 0.1175978659 - - PREDICTED: basic 7S globulin 2-like [Jatropha curcas]
16 Hb_000465_020 0.1187031504 - - PREDICTED: uncharacterized protein LOC105632280 [Jatropha curcas]
17 Hb_022092_110 0.1198605125 - - PREDICTED: probable protein phosphatase 2C 52 [Jatropha curcas]
18 Hb_002053_180 0.1200876084 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
19 Hb_007894_120 0.1206338615 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas]
20 Hb_000002_370 0.1209651207 - - PREDICTED: uncharacterized protein LOC105632103 [Jatropha curcas]

Gene co-expression network

sample Hb_007130_020 Hb_007130_020 Hb_044653_050 Hb_044653_050 Hb_007130_020--Hb_044653_050 Hb_002311_280 Hb_002311_280 Hb_007130_020--Hb_002311_280 Hb_000836_090 Hb_000836_090 Hb_007130_020--Hb_000836_090 Hb_006922_020 Hb_006922_020 Hb_007130_020--Hb_006922_020 Hb_033006_020 Hb_033006_020 Hb_007130_020--Hb_033006_020 Hb_004228_070 Hb_004228_070 Hb_007130_020--Hb_004228_070 Hb_007894_120 Hb_007894_120 Hb_044653_050--Hb_007894_120 Hb_017491_010 Hb_017491_010 Hb_044653_050--Hb_017491_010 Hb_044653_050--Hb_004228_070 Hb_005365_010 Hb_005365_010 Hb_044653_050--Hb_005365_010 Hb_001301_260 Hb_001301_260 Hb_044653_050--Hb_001301_260 Hb_022092_110 Hb_022092_110 Hb_002311_280--Hb_022092_110 Hb_003266_090 Hb_003266_090 Hb_002311_280--Hb_003266_090 Hb_002311_280--Hb_033006_020 Hb_002311_280--Hb_044653_050 Hb_000181_330 Hb_000181_330 Hb_002311_280--Hb_000181_330 Hb_000836_090--Hb_033006_020 Hb_002053_180 Hb_002053_180 Hb_000836_090--Hb_002053_180 Hb_000905_100 Hb_000905_100 Hb_000836_090--Hb_000905_100 Hb_000002_370 Hb_000002_370 Hb_000836_090--Hb_000002_370 Hb_000199_040 Hb_000199_040 Hb_000836_090--Hb_000199_040 Hb_007123_010 Hb_007123_010 Hb_006922_020--Hb_007123_010 Hb_002490_060 Hb_002490_060 Hb_006922_020--Hb_002490_060 Hb_000627_040 Hb_000627_040 Hb_006922_020--Hb_000627_040 Hb_006922_020--Hb_002053_180 Hb_000103_370 Hb_000103_370 Hb_006922_020--Hb_000103_370 Hb_006922_020--Hb_004228_070 Hb_000645_260 Hb_000645_260 Hb_033006_020--Hb_000645_260 Hb_001377_120 Hb_001377_120 Hb_033006_020--Hb_001377_120 Hb_000465_020 Hb_000465_020 Hb_033006_020--Hb_000465_020 Hb_021576_130 Hb_021576_130 Hb_004228_070--Hb_021576_130 Hb_002205_150 Hb_002205_150 Hb_004228_070--Hb_002205_150 Hb_003454_050 Hb_003454_050 Hb_004228_070--Hb_003454_050 Hb_004228_070--Hb_007123_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.07887 70.2881 138.772 105.373 0 2.32919
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.27145 2.24889 1.16925 17.4877 79.7407

CAGE analysis