Hb_003266_090

Information

Type -
Description -
Location Contig3266: 48128-51456
Sequence    

Annotation

kegg
ID tcc:TCM_004428
description Eukaryotic aspartyl protease family protein, putative
nr
ID XP_012092272.1
description PREDICTED: basic 7S globulin 2-like [Jatropha curcas]
swissprot
ID Q9LZL3
description Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1
trembl
ID A0A067JCA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21952 PE=4 SV=1
Gene Ontology
ID GO:0004190
description basic 7s globulin-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34350: 48559-48835
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003266_090 0.0 - - PREDICTED: basic 7S globulin 2-like [Jatropha curcas]
2 Hb_002311_280 0.092448301 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
3 Hb_022092_110 0.0932731894 - - PREDICTED: probable protein phosphatase 2C 52 [Jatropha curcas]
4 Hb_001318_100 0.0950968754 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
5 Hb_003581_050 0.0979451797 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-54 [Jatropha curcas]
6 Hb_002518_220 0.1004634208 - - PREDICTED: uncharacterized protein LOC105631001 isoform X2 [Jatropha curcas]
7 Hb_003454_050 0.1015613975 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
8 Hb_028008_040 0.1016696559 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004228_070 0.1019967531 - - PREDICTED: uncharacterized protein LOC103338699 [Prunus mume]
10 Hb_021576_130 0.1021941198 - - PREDICTED: chorismate mutase 2 isoform X1 [Jatropha curcas]
11 Hb_000742_130 0.1043526046 - - PREDICTED: probable receptor-like protein kinase At1g30570 [Jatropha curcas]
12 Hb_000856_200 0.1057059142 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
13 Hb_001054_040 0.1070807241 - - hypothetical protein JCGZ_25310 [Jatropha curcas]
14 Hb_001946_200 0.1137649255 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
15 Hb_044653_050 0.1165895652 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
16 Hb_001936_180 0.1175597477 - - PREDICTED: protein NSP-INTERACTING KINASE 3 [Jatropha curcas]
17 Hb_007130_020 0.1175978659 - - -
18 Hb_007221_040 0.1182663675 - - PREDICTED: probable receptor-like protein kinase At5g24010 isoform X2 [Populus euphratica]
19 Hb_002205_150 0.1198092264 - - RING-H2 finger protein ATL3C, putative [Ricinus communis]
20 Hb_000617_330 0.1203834563 - - PREDICTED: uncharacterized protein LOC105647507 [Jatropha curcas]

Gene co-expression network

sample Hb_003266_090 Hb_003266_090 Hb_002311_280 Hb_002311_280 Hb_003266_090--Hb_002311_280 Hb_022092_110 Hb_022092_110 Hb_003266_090--Hb_022092_110 Hb_001318_100 Hb_001318_100 Hb_003266_090--Hb_001318_100 Hb_003581_050 Hb_003581_050 Hb_003266_090--Hb_003581_050 Hb_002518_220 Hb_002518_220 Hb_003266_090--Hb_002518_220 Hb_003454_050 Hb_003454_050 Hb_003266_090--Hb_003454_050 Hb_007130_020 Hb_007130_020 Hb_002311_280--Hb_007130_020 Hb_002311_280--Hb_022092_110 Hb_033006_020 Hb_033006_020 Hb_002311_280--Hb_033006_020 Hb_044653_050 Hb_044653_050 Hb_002311_280--Hb_044653_050 Hb_000181_330 Hb_000181_330 Hb_002311_280--Hb_000181_330 Hb_001936_180 Hb_001936_180 Hb_022092_110--Hb_001936_180 Hb_001946_200 Hb_001946_200 Hb_022092_110--Hb_001946_200 Hb_001440_010 Hb_001440_010 Hb_022092_110--Hb_001440_010 Hb_000735_060 Hb_000735_060 Hb_022092_110--Hb_000735_060 Hb_000418_170 Hb_000418_170 Hb_022092_110--Hb_000418_170 Hb_010222_040 Hb_010222_040 Hb_001318_100--Hb_010222_040 Hb_009113_080 Hb_009113_080 Hb_001318_100--Hb_009113_080 Hb_000659_040 Hb_000659_040 Hb_001318_100--Hb_000659_040 Hb_003125_210 Hb_003125_210 Hb_001318_100--Hb_003125_210 Hb_000856_200 Hb_000856_200 Hb_001318_100--Hb_000856_200 Hb_007221_040 Hb_007221_040 Hb_003581_050--Hb_007221_040 Hb_003581_050--Hb_002518_220 Hb_007441_360 Hb_007441_360 Hb_003581_050--Hb_007441_360 Hb_010174_200 Hb_010174_200 Hb_003581_050--Hb_010174_200 Hb_007257_070 Hb_007257_070 Hb_003581_050--Hb_007257_070 Hb_000742_130 Hb_000742_130 Hb_002518_220--Hb_000742_130 Hb_043630_030 Hb_043630_030 Hb_002518_220--Hb_043630_030 Hb_006120_210 Hb_006120_210 Hb_002518_220--Hb_006120_210 Hb_012539_100 Hb_012539_100 Hb_002518_220--Hb_012539_100 Hb_106089_010 Hb_106089_010 Hb_003454_050--Hb_106089_010 Hb_002205_150 Hb_002205_150 Hb_003454_050--Hb_002205_150 Hb_004228_070 Hb_004228_070 Hb_003454_050--Hb_004228_070 Hb_142026_010 Hb_142026_010 Hb_003454_050--Hb_142026_010 Hb_002902_040 Hb_002902_040 Hb_003454_050--Hb_002902_040 Hb_026240_020 Hb_026240_020 Hb_003454_050--Hb_026240_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0803634 3.17395 5.69996 7.93287 0.0828577 0.0559414
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.142523 0.140187 0.0267206 1.22478 4.61794

CAGE analysis