Hb_010222_040

Information

Type -
Description -
Location Contig10222: 30428-33785
Sequence    

Annotation

kegg
ID pop:POPTR_0030s00220g
description kinesin motor family protein
nr
ID XP_012089195.1
description PREDICTED: kinesin-2 [Jatropha curcas]
swissprot
ID P46864
description Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1
trembl
ID A0A067JI98
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_23445 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-like protein kifc3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01037: 30741-32101 , PASA_asmbl_01038: 32564-33283 , PASA_asmbl_01039: 33804-34045 , PASA_asmbl_01040: 34059-34411
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010222_040 0.0 - - PREDICTED: kinesin-2 [Jatropha curcas]
2 Hb_000856_200 0.0729788145 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
3 Hb_010557_020 0.0823915667 - - Mlo protein [Hevea brasiliensis]
4 Hb_000290_030 0.0899325704 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
5 Hb_144449_010 0.0975181803 - - Potassium transporter, putative [Ricinus communis]
6 Hb_001318_100 0.1013120705 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
7 Hb_000333_030 0.1045235876 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
8 Hb_003125_210 0.1108698206 - - Phospholipase C 4 precursor, putative [Ricinus communis]
9 Hb_003580_050 0.1124915662 - - PREDICTED: TBC1 domain family member 2B [Jatropha curcas]
10 Hb_001369_390 0.1137026905 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
11 Hb_001268_150 0.1138440935 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
12 Hb_000160_250 0.1147915433 - - Uncharacterized protein TCM_019235 [Theobroma cacao]
13 Hb_002284_060 0.1155545148 - - sugar transporter, putative [Ricinus communis]
14 Hb_004696_010 0.1190449649 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
15 Hb_000473_100 0.1190635459 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
16 Hb_001946_200 0.1210059658 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
17 Hb_009113_080 0.1222608147 - - PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]
18 Hb_002724_010 0.1225121152 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Citrus sinensis]
19 Hb_000977_030 0.1246597466 - - unnamed protein product [Vitis vinifera]
20 Hb_028396_020 0.1253252302 - - PREDICTED: ras-related protein Rab7 [Jatropha curcas]

Gene co-expression network

sample Hb_010222_040 Hb_010222_040 Hb_000856_200 Hb_000856_200 Hb_010222_040--Hb_000856_200 Hb_010557_020 Hb_010557_020 Hb_010222_040--Hb_010557_020 Hb_000290_030 Hb_000290_030 Hb_010222_040--Hb_000290_030 Hb_144449_010 Hb_144449_010 Hb_010222_040--Hb_144449_010 Hb_001318_100 Hb_001318_100 Hb_010222_040--Hb_001318_100 Hb_000333_030 Hb_000333_030 Hb_010222_040--Hb_000333_030 Hb_000856_200--Hb_010557_020 Hb_000856_200--Hb_000290_030 Hb_000473_100 Hb_000473_100 Hb_000856_200--Hb_000473_100 Hb_001046_030 Hb_001046_030 Hb_000856_200--Hb_001046_030 Hb_000856_200--Hb_144449_010 Hb_010557_020--Hb_000290_030 Hb_010557_020--Hb_144449_010 Hb_010557_020--Hb_000473_100 Hb_000162_200 Hb_000162_200 Hb_010557_020--Hb_000162_200 Hb_000977_030 Hb_000977_030 Hb_000290_030--Hb_000977_030 Hb_002724_010 Hb_002724_010 Hb_000290_030--Hb_002724_010 Hb_000160_250 Hb_000160_250 Hb_000290_030--Hb_000160_250 Hb_000290_030--Hb_000473_100 Hb_144449_010--Hb_000473_100 Hb_003266_010 Hb_003266_010 Hb_144449_010--Hb_003266_010 Hb_004607_160 Hb_004607_160 Hb_144449_010--Hb_004607_160 Hb_152980_020 Hb_152980_020 Hb_144449_010--Hb_152980_020 Hb_003266_090 Hb_003266_090 Hb_001318_100--Hb_003266_090 Hb_009113_080 Hb_009113_080 Hb_001318_100--Hb_009113_080 Hb_000659_040 Hb_000659_040 Hb_001318_100--Hb_000659_040 Hb_003125_210 Hb_003125_210 Hb_001318_100--Hb_003125_210 Hb_001318_100--Hb_000856_200 Hb_000574_170 Hb_000574_170 Hb_000333_030--Hb_000574_170 Hb_002217_360 Hb_002217_360 Hb_000333_030--Hb_002217_360 Hb_001677_040 Hb_001677_040 Hb_000333_030--Hb_001677_040 Hb_000083_080 Hb_000083_080 Hb_000333_030--Hb_000083_080 Hb_002662_110 Hb_002662_110 Hb_000333_030--Hb_002662_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.108464 1.97662 4.2102 7.81383 0.0834912 0.233703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.110034 0.138526 0.0328561 1.94228 6.29842

CAGE analysis