Hb_009113_080

Information

Type -
Description -
Location Contig9113: 60817-66408
Sequence    

Annotation

kegg
ID rcu:RCOM_0528960
description catalytic, putative
nr
ID XP_012085364.1
description PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]
swissprot
ID B0G107
description Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog OS=Dictyostelium discoideum GN=DDB_G0272484 PE=3 SV=1
trembl
ID A0A067K2U4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17733 PE=4 SV=1
Gene Ontology
ID GO:0005737
description deoxynucleoside triphosphate triphosphohydrolase samhd1 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62147: 61868-63086
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009113_080 0.0 - - PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]
2 Hb_001946_200 0.0941957557 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
3 Hb_001085_190 0.0996282442 transcription factor TF Family: ERF AP2 domain-containing transcription factor family protein [Populus trichocarpa]
4 Hb_000977_030 0.1013508908 - - unnamed protein product [Vitis vinifera]
5 Hb_000005_360 0.1016142087 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003125_210 0.1027588532 - - Phospholipase C 4 precursor, putative [Ricinus communis]
7 Hb_001318_100 0.104177993 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
8 Hb_000290_030 0.1049844484 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
9 Hb_011918_070 0.1134070972 - - PREDICTED: probable inactive receptor kinase At1g48480 [Jatropha curcas]
10 Hb_004696_010 0.1157912878 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
11 Hb_026240_020 0.1184375661 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
12 Hb_001936_180 0.118913845 - - PREDICTED: protein NSP-INTERACTING KINASE 3 [Jatropha curcas]
13 Hb_001269_400 0.1189662377 - - cinnamoyl-CoA reductase [Hevea brasiliensis]
14 Hb_001247_150 0.1202369886 - - hypothetical protein JCGZ_23179 [Jatropha curcas]
15 Hb_010222_040 0.1222608147 - - PREDICTED: kinesin-2 [Jatropha curcas]
16 Hb_003454_050 0.1226422229 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
17 Hb_000473_100 0.1243731005 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
18 Hb_022092_110 0.1253261061 - - PREDICTED: probable protein phosphatase 2C 52 [Jatropha curcas]
19 Hb_021576_130 0.1271418568 - - PREDICTED: chorismate mutase 2 isoform X1 [Jatropha curcas]
20 Hb_002171_020 0.1281018351 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_009113_080 Hb_009113_080 Hb_001946_200 Hb_001946_200 Hb_009113_080--Hb_001946_200 Hb_001085_190 Hb_001085_190 Hb_009113_080--Hb_001085_190 Hb_000977_030 Hb_000977_030 Hb_009113_080--Hb_000977_030 Hb_000005_360 Hb_000005_360 Hb_009113_080--Hb_000005_360 Hb_003125_210 Hb_003125_210 Hb_009113_080--Hb_003125_210 Hb_001318_100 Hb_001318_100 Hb_009113_080--Hb_001318_100 Hb_001440_010 Hb_001440_010 Hb_001946_200--Hb_001440_010 Hb_022092_110 Hb_022092_110 Hb_001946_200--Hb_022092_110 Hb_001936_180 Hb_001936_180 Hb_001946_200--Hb_001936_180 Hb_026240_020 Hb_026240_020 Hb_001946_200--Hb_026240_020 Hb_032920_030 Hb_032920_030 Hb_001946_200--Hb_032920_030 Hb_000735_020 Hb_000735_020 Hb_001085_190--Hb_000735_020 Hb_011918_070 Hb_011918_070 Hb_001085_190--Hb_011918_070 Hb_012518_080 Hb_012518_080 Hb_001085_190--Hb_012518_080 Hb_001085_190--Hb_000005_360 Hb_003606_050 Hb_003606_050 Hb_001085_190--Hb_003606_050 Hb_000977_030--Hb_026240_020 Hb_000290_030 Hb_000290_030 Hb_000977_030--Hb_000290_030 Hb_003580_050 Hb_003580_050 Hb_000977_030--Hb_003580_050 Hb_000162_200 Hb_000162_200 Hb_000977_030--Hb_000162_200 Hb_005892_040 Hb_005892_040 Hb_000977_030--Hb_005892_040 Hb_002724_010 Hb_002724_010 Hb_000977_030--Hb_002724_010 Hb_000329_720 Hb_000329_720 Hb_000005_360--Hb_000329_720 Hb_002171_020 Hb_002171_020 Hb_000005_360--Hb_002171_020 Hb_009189_100 Hb_009189_100 Hb_000005_360--Hb_009189_100 Hb_012404_020 Hb_012404_020 Hb_000005_360--Hb_012404_020 Hb_000742_130 Hb_000742_130 Hb_000005_360--Hb_000742_130 Hb_004696_010 Hb_004696_010 Hb_003125_210--Hb_004696_010 Hb_002815_020 Hb_002815_020 Hb_003125_210--Hb_002815_020 Hb_003086_030 Hb_003086_030 Hb_003125_210--Hb_003086_030 Hb_001951_080 Hb_001951_080 Hb_003125_210--Hb_001951_080 Hb_010222_040 Hb_010222_040 Hb_003125_210--Hb_010222_040 Hb_003266_090 Hb_003266_090 Hb_001318_100--Hb_003266_090 Hb_001318_100--Hb_010222_040 Hb_000659_040 Hb_000659_040 Hb_001318_100--Hb_000659_040 Hb_001318_100--Hb_003125_210 Hb_000856_200 Hb_000856_200 Hb_001318_100--Hb_000856_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0975385 1.65339 3.92123 6.97518 0.0236405 0.0624885
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.170362 1.4696 3.74748

CAGE analysis