Hb_000290_030

Information

Type -
Description -
Location Contig290: 18685-24409
Sequence    

Annotation

kegg
ID rcu:RCOM_0708920
description phosphoinositide 5-phosphatase, putative
nr
ID XP_002516207.1
description phosphoinositide 5-phosphatase, putative [Ricinus communis]
swissprot
ID Q7XZU1
description Phosphoinositide phosphatase SAC4 OS=Arabidopsis thaliana GN=SAC4 PE=2 SV=1
trembl
ID B9RR38
description Phosphoinositide 5-phosphatase, putative OS=Ricinus communis GN=RCOM_0708920 PE=4 SV=1
Gene Ontology
ID GO:0004571
description phosphoinositide phosphatase sac3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30392: 19070-22046
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000290_030 0.0 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
2 Hb_010557_020 0.061407549 - - Mlo protein [Hevea brasiliensis]
3 Hb_000977_030 0.0797773547 - - unnamed protein product [Vitis vinifera]
4 Hb_000856_200 0.0821574542 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]
5 Hb_002724_010 0.0836415364 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Citrus sinensis]
6 Hb_000160_250 0.0844504275 - - Uncharacterized protein TCM_019235 [Theobroma cacao]
7 Hb_000473_100 0.089724589 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
8 Hb_010222_040 0.0899325704 - - PREDICTED: kinesin-2 [Jatropha curcas]
9 Hb_002942_200 0.0925097582 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH137 isoform X1 [Jatropha curcas]
10 Hb_004696_010 0.100060447 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500 [Jatropha curcas]
11 Hb_000162_200 0.1008554346 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
12 Hb_001417_060 0.1011252346 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
13 Hb_001369_390 0.1022322537 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
14 Hb_001268_150 0.1026610578 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
15 Hb_009113_080 0.1049844484 - - PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]
16 Hb_003580_050 0.1084768312 - - PREDICTED: TBC1 domain family member 2B [Jatropha curcas]
17 Hb_026240_020 0.1086800843 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
18 Hb_000977_020 0.1087054991 - - beta-hexosaminidase, putative [Ricinus communis]
19 Hb_017358_020 0.1093550151 - - hypothetical protein POPTR_0014s16490g [Populus trichocarpa]
20 Hb_144449_010 0.1116204796 - - Potassium transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000290_030 Hb_000290_030 Hb_010557_020 Hb_010557_020 Hb_000290_030--Hb_010557_020 Hb_000977_030 Hb_000977_030 Hb_000290_030--Hb_000977_030 Hb_000856_200 Hb_000856_200 Hb_000290_030--Hb_000856_200 Hb_002724_010 Hb_002724_010 Hb_000290_030--Hb_002724_010 Hb_000160_250 Hb_000160_250 Hb_000290_030--Hb_000160_250 Hb_000473_100 Hb_000473_100 Hb_000290_030--Hb_000473_100 Hb_010557_020--Hb_000856_200 Hb_010222_040 Hb_010222_040 Hb_010557_020--Hb_010222_040 Hb_144449_010 Hb_144449_010 Hb_010557_020--Hb_144449_010 Hb_010557_020--Hb_000473_100 Hb_000162_200 Hb_000162_200 Hb_010557_020--Hb_000162_200 Hb_026240_020 Hb_026240_020 Hb_000977_030--Hb_026240_020 Hb_003580_050 Hb_003580_050 Hb_000977_030--Hb_003580_050 Hb_000977_030--Hb_000162_200 Hb_005892_040 Hb_005892_040 Hb_000977_030--Hb_005892_040 Hb_000977_030--Hb_002724_010 Hb_000856_200--Hb_010222_040 Hb_000856_200--Hb_000473_100 Hb_001046_030 Hb_001046_030 Hb_000856_200--Hb_001046_030 Hb_000856_200--Hb_144449_010 Hb_000977_020 Hb_000977_020 Hb_002724_010--Hb_000977_020 Hb_000703_120 Hb_000703_120 Hb_002724_010--Hb_000703_120 Hb_000212_410 Hb_000212_410 Hb_002724_010--Hb_000212_410 Hb_000318_010 Hb_000318_010 Hb_002724_010--Hb_000318_010 Hb_000627_050 Hb_000627_050 Hb_002724_010--Hb_000627_050 Hb_001268_150 Hb_001268_150 Hb_000160_250--Hb_001268_150 Hb_002942_200 Hb_002942_200 Hb_000160_250--Hb_002942_200 Hb_008221_200 Hb_008221_200 Hb_000160_250--Hb_008221_200 Hb_004696_010 Hb_004696_010 Hb_000160_250--Hb_004696_010 Hb_000718_060 Hb_000718_060 Hb_000160_250--Hb_000718_060 Hb_000868_130 Hb_000868_130 Hb_000473_100--Hb_000868_130 Hb_000473_100--Hb_144449_010 Hb_002902_040 Hb_002902_040 Hb_000473_100--Hb_002902_040 Hb_000069_540 Hb_000069_540 Hb_000473_100--Hb_000069_540 Hb_001269_400 Hb_001269_400 Hb_000473_100--Hb_001269_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.041118 4.97045 12.5822 20.6905 0 0.0632861
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.134294 0.10566 0.0797771 4.95995 16.13

CAGE analysis