Hb_000703_120

Information

Type -
Description -
Location Contig703: 132194-134914
Sequence    

Annotation

kegg
ID rcu:RCOM_0613890
description hypothetical protein
nr
ID XP_012074178.1
description PREDICTED: uncharacterized protein LOC105635706 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMU4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09805 PE=4 SV=1
Gene Ontology
ID GO:0008152
description protein arginine n-methyltransferase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54927: 132092-135607 , PASA_asmbl_54928: 135074-135382
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000703_120 0.0 - - PREDICTED: uncharacterized protein LOC105635706 isoform X1 [Jatropha curcas]
2 Hb_000627_050 0.0483186597 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]
3 Hb_009788_020 0.0488483745 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Jatropha curcas]
4 Hb_000212_410 0.0497028488 - - PREDICTED: serine carboxypeptidase 1-like [Jatropha curcas]
5 Hb_002890_200 0.0668564188 - - PREDICTED: methionine S-methyltransferase [Jatropha curcas]
6 Hb_002724_010 0.0676956621 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Citrus sinensis]
7 Hb_007270_020 0.0775518864 - - hypothetical protein JCGZ_09593 [Jatropha curcas]
8 Hb_000318_010 0.0794948669 - - calcium-dependent protein kinase 6 [Hevea brasiliensis]
9 Hb_000023_130 0.0875428572 - - Metal-nicotianamine transporter YSL1 [Glycine soja]
10 Hb_004855_080 0.0904886932 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
11 Hb_000977_020 0.090847979 - - beta-hexosaminidase, putative [Ricinus communis]
12 Hb_060253_010 0.091239167 - - hypothetical protein JCGZ_14707 [Jatropha curcas]
13 Hb_069696_020 0.0915493335 - - PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Jatropha curcas]
14 Hb_131876_010 0.0917334029 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like isoform X1 [Jatropha curcas]
15 Hb_001488_420 0.0926806531 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
16 Hb_002822_010 0.0939393384 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
17 Hb_001417_060 0.0956784564 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
18 Hb_001098_040 0.099458469 - - hypothetical protein JCGZ_00749 [Jatropha curcas]
19 Hb_001051_010 0.1009743816 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
20 Hb_004946_010 0.1050951079 - - hypothetical protein POPTR_0013s035502g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_000703_120 Hb_000703_120 Hb_000627_050 Hb_000627_050 Hb_000703_120--Hb_000627_050 Hb_009788_020 Hb_009788_020 Hb_000703_120--Hb_009788_020 Hb_000212_410 Hb_000212_410 Hb_000703_120--Hb_000212_410 Hb_002890_200 Hb_002890_200 Hb_000703_120--Hb_002890_200 Hb_002724_010 Hb_002724_010 Hb_000703_120--Hb_002724_010 Hb_007270_020 Hb_007270_020 Hb_000703_120--Hb_007270_020 Hb_000627_050--Hb_000212_410 Hb_000627_050--Hb_009788_020 Hb_000627_050--Hb_007270_020 Hb_069696_020 Hb_069696_020 Hb_000627_050--Hb_069696_020 Hb_000977_020 Hb_000977_020 Hb_000627_050--Hb_000977_020 Hb_009788_020--Hb_000212_410 Hb_009788_020--Hb_007270_020 Hb_060253_010 Hb_060253_010 Hb_009788_020--Hb_060253_010 Hb_001488_420 Hb_001488_420 Hb_009788_020--Hb_001488_420 Hb_000212_410--Hb_007270_020 Hb_000212_410--Hb_002724_010 Hb_000212_410--Hb_060253_010 Hb_002890_200--Hb_000627_050 Hb_002890_200--Hb_009788_020 Hb_002822_010 Hb_002822_010 Hb_002890_200--Hb_002822_010 Hb_004855_080 Hb_004855_080 Hb_002890_200--Hb_004855_080 Hb_002890_200--Hb_001488_420 Hb_002724_010--Hb_000977_020 Hb_000318_010 Hb_000318_010 Hb_002724_010--Hb_000318_010 Hb_002724_010--Hb_000627_050 Hb_000290_030 Hb_000290_030 Hb_002724_010--Hb_000290_030 Hb_007270_020--Hb_060253_010 Hb_003873_020 Hb_003873_020 Hb_007270_020--Hb_003873_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0328381 1.29536 5.73084 4.96537 0.0145035 0.0072831
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0263808 1.45056 6.94194

CAGE analysis