Hb_005730_110

Information

Type -
Description -
Location Contig5730: 125113-130269
Sequence    

Annotation

kegg
ID rcu:RCOM_0312960
description ATP binding protein, putative
nr
ID XP_012069004.1
description PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
swissprot
ID P0DH62
description Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1
trembl
ID A0A067L0Q4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24792 PE=4 SV=1
Gene Ontology
ID GO:0004672
description inactive protein kinase selmodraft_444075-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49465: 124989-130526
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005730_110 0.0 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
2 Hb_000627_040 0.0758374509 - - leucine-rich repeat protein, putative [Ricinus communis]
3 Hb_026240_020 0.0860207409 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g59780 [Jatropha curcas]
4 Hb_012404_020 0.087332262 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000418_170 0.0909906642 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
6 Hb_022092_110 0.0919078382 - - PREDICTED: probable protein phosphatase 2C 52 [Jatropha curcas]
7 Hb_004592_010 0.092582965 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b-like [Jatropha curcas]
8 Hb_001488_420 0.093271061 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
9 Hb_002490_060 0.0999169717 - - PREDICTED: uncharacterized protein LOC105638743 [Jatropha curcas]
10 Hb_028008_040 0.1019350293 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000977_030 0.1022418135 - - unnamed protein product [Vitis vinifera]
12 Hb_128196_010 0.1033714451 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001104_150 0.1054588424 - - PREDICTED: protein ROS1 [Jatropha curcas]
14 Hb_003580_050 0.1077192143 - - PREDICTED: TBC1 domain family member 2B [Jatropha curcas]
15 Hb_001946_200 0.1083452549 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
16 Hb_003506_010 0.1090741635 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
17 Hb_001936_190 0.110616276 - - hypothetical protein JCGZ_17780 [Jatropha curcas]
18 Hb_008304_010 0.1114035135 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
19 Hb_070498_010 0.1130025084 - - receptor kinase, putative [Ricinus communis]
20 Hb_007237_020 0.1144145807 - - PREDICTED: protein trichome birefringence-like 23 [Jatropha curcas]

Gene co-expression network

sample Hb_005730_110 Hb_005730_110 Hb_000627_040 Hb_000627_040 Hb_005730_110--Hb_000627_040 Hb_026240_020 Hb_026240_020 Hb_005730_110--Hb_026240_020 Hb_012404_020 Hb_012404_020 Hb_005730_110--Hb_012404_020 Hb_000418_170 Hb_000418_170 Hb_005730_110--Hb_000418_170 Hb_022092_110 Hb_022092_110 Hb_005730_110--Hb_022092_110 Hb_004592_010 Hb_004592_010 Hb_005730_110--Hb_004592_010 Hb_002490_060 Hb_002490_060 Hb_000627_040--Hb_002490_060 Hb_007237_020 Hb_007237_020 Hb_000627_040--Hb_007237_020 Hb_121313_010 Hb_121313_010 Hb_000627_040--Hb_121313_010 Hb_002053_180 Hb_002053_180 Hb_000627_040--Hb_002053_180 Hb_006922_020 Hb_006922_020 Hb_000627_040--Hb_006922_020 Hb_000977_030 Hb_000977_030 Hb_026240_020--Hb_000977_030 Hb_003092_020 Hb_003092_020 Hb_026240_020--Hb_003092_020 Hb_005892_040 Hb_005892_040 Hb_026240_020--Hb_005892_040 Hb_003454_050 Hb_003454_050 Hb_026240_020--Hb_003454_050 Hb_003506_010 Hb_003506_010 Hb_026240_020--Hb_003506_010 Hb_070498_010 Hb_070498_010 Hb_012404_020--Hb_070498_010 Hb_002301_400 Hb_002301_400 Hb_012404_020--Hb_002301_400 Hb_128196_010 Hb_128196_010 Hb_012404_020--Hb_128196_010 Hb_001366_290 Hb_001366_290 Hb_012404_020--Hb_001366_290 Hb_028008_040 Hb_028008_040 Hb_012404_020--Hb_028008_040 Hb_000418_170--Hb_000627_040 Hb_000418_170--Hb_022092_110 Hb_001936_180 Hb_001936_180 Hb_000418_170--Hb_001936_180 Hb_005675_050 Hb_005675_050 Hb_000418_170--Hb_005675_050 Hb_021065_010 Hb_021065_010 Hb_000418_170--Hb_021065_010 Hb_022092_110--Hb_001936_180 Hb_001946_200 Hb_001946_200 Hb_022092_110--Hb_001946_200 Hb_001440_010 Hb_001440_010 Hb_022092_110--Hb_001440_010 Hb_000735_060 Hb_000735_060 Hb_022092_110--Hb_000735_060 Hb_002311_280 Hb_002311_280 Hb_022092_110--Hb_002311_280 Hb_019570_010 Hb_019570_010 Hb_004592_010--Hb_019570_010 Hb_003666_070 Hb_003666_070 Hb_004592_010--Hb_003666_070 Hb_008304_010 Hb_008304_010 Hb_004592_010--Hb_008304_010 Hb_000732_220 Hb_000732_220 Hb_004592_010--Hb_000732_220 Hb_000359_180 Hb_000359_180 Hb_004592_010--Hb_000359_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.1378 2.86607 11.518 9.32608 0.18161 0.0776017
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0295713 0 0.0445008 2.87533 6.72527

CAGE analysis