Hb_007576_130

Information

Type -
Description -
Location Contig7576: 133811-135264
Sequence    

Annotation

kegg
ID rcu:RCOM_0266100
description lipid binding protein, putative
nr
ID XP_012084610.1
description PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
swissprot
ID Q8VYI9
description Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1
trembl
ID A0A067K538
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20199 PE=4 SV=1
Gene Ontology
ID GO:0008289
description non-specific lipid-transfer protein at5g64080

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57123: 133747-135299 , PASA_asmbl_57124: 134306-134600
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007576_130 0.0 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
2 Hb_007120_130 0.1130989236 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000538_250 0.1223248882 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Jatropha curcas]
4 Hb_001638_190 0.1274994281 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
5 Hb_001898_100 0.129665729 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Jatropha curcas]
6 Hb_001352_030 0.1300547683 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
7 Hb_003337_020 0.1317904482 - - PREDICTED: uncharacterized protein LOC105116455 [Populus euphratica]
8 Hb_003020_070 0.1326335755 - - PREDICTED: uncharacterized protein LOC103997323 [Musa acuminata subsp. malaccensis]
9 Hb_010534_040 0.1327049497 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
10 Hb_006789_030 0.1376634101 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
11 Hb_000345_400 0.1405958141 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000265_170 0.1420602282 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
13 Hb_002890_160 0.1442292123 - - PREDICTED: protein root UVB sensitive 6 isoform X1 [Jatropha curcas]
14 Hb_003531_050 0.1454391105 - - PREDICTED: pyridoxal reductase, chloroplastic [Jatropha curcas]
15 Hb_000212_270 0.1478378257 - - calreticulin, putative [Ricinus communis]
16 Hb_005486_020 0.1484250392 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
17 Hb_003777_120 0.1484705135 - - -
18 Hb_000175_200 0.1491819099 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003759_040 0.150379767 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
20 Hb_001544_060 0.1513139864 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB4 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_007576_130 Hb_007576_130 Hb_007120_130 Hb_007120_130 Hb_007576_130--Hb_007120_130 Hb_000538_250 Hb_000538_250 Hb_007576_130--Hb_000538_250 Hb_001638_190 Hb_001638_190 Hb_007576_130--Hb_001638_190 Hb_001898_100 Hb_001898_100 Hb_007576_130--Hb_001898_100 Hb_001352_030 Hb_001352_030 Hb_007576_130--Hb_001352_030 Hb_003337_020 Hb_003337_020 Hb_007576_130--Hb_003337_020 Hb_003759_040 Hb_003759_040 Hb_007120_130--Hb_003759_040 Hb_006789_030 Hb_006789_030 Hb_007120_130--Hb_006789_030 Hb_000020_020 Hb_000020_020 Hb_007120_130--Hb_000020_020 Hb_000185_170 Hb_000185_170 Hb_007120_130--Hb_000185_170 Hb_005486_020 Hb_005486_020 Hb_007120_130--Hb_005486_020 Hb_000212_270 Hb_000212_270 Hb_000538_250--Hb_000212_270 Hb_000538_250--Hb_003337_020 Hb_002890_160 Hb_002890_160 Hb_000538_250--Hb_002890_160 Hb_000345_400 Hb_000345_400 Hb_000538_250--Hb_000345_400 Hb_000265_170 Hb_000265_170 Hb_000538_250--Hb_000265_170 Hb_001638_190--Hb_000345_400 Hb_000188_070 Hb_000188_070 Hb_001638_190--Hb_000188_070 Hb_000692_060 Hb_000692_060 Hb_001638_190--Hb_000692_060 Hb_001958_030 Hb_001958_030 Hb_001638_190--Hb_001958_030 Hb_001655_080 Hb_001655_080 Hb_001638_190--Hb_001655_080 Hb_000358_160 Hb_000358_160 Hb_001638_190--Hb_000358_160 Hb_001898_100--Hb_000212_270 Hb_001544_060 Hb_001544_060 Hb_001898_100--Hb_001544_060 Hb_001898_100--Hb_003337_020 Hb_001898_100--Hb_006789_030 Hb_000175_200 Hb_000175_200 Hb_001898_100--Hb_000175_200 Hb_001266_130 Hb_001266_130 Hb_001898_100--Hb_001266_130 Hb_003531_050 Hb_003531_050 Hb_001352_030--Hb_003531_050 Hb_001352_030--Hb_000265_170 Hb_001606_010 Hb_001606_010 Hb_001352_030--Hb_001606_010 Hb_010534_040 Hb_010534_040 Hb_001352_030--Hb_010534_040 Hb_001352_030--Hb_005486_020 Hb_001352_030--Hb_002890_160 Hb_003337_020--Hb_000265_170 Hb_063405_010 Hb_063405_010 Hb_003337_020--Hb_063405_010 Hb_000697_020 Hb_000697_020 Hb_003337_020--Hb_000697_020 Hb_003337_020--Hb_001544_060 Hb_005888_050 Hb_005888_050 Hb_003337_020--Hb_005888_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.16042 17.8563 4.40811 0 0.221925
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.713804 0.115597 1.98146 8.32711

CAGE analysis