Hb_005839_030

Information

Type -
Description -
Location Contig5839: 33087-40231
Sequence    

Annotation

kegg
ID rcu:RCOM_0689490
description Potassium transporter, putative
nr
ID XP_012091163.1
description PREDICTED: potassium transporter 2 [Jatropha curcas]
swissprot
ID O22881
description Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2
trembl
ID A0A067JFV5
description Potassium transporter OS=Jatropha curcas GN=JCGZ_03339 PE=3 SV=1
Gene Ontology
ID GO:0016021
description potassium transporter 2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49898: 34797-40079
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005839_030 0.0 - - PREDICTED: potassium transporter 2 [Jatropha curcas]
2 Hb_002592_050 0.0960600227 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
3 Hb_000696_030 0.1064776731 - - PREDICTED: uncharacterized protein LOC105647085 isoform X1 [Jatropha curcas]
4 Hb_001157_190 0.1108138743 - - PREDICTED: protein YLS3 [Jatropha curcas]
5 Hb_005144_080 0.1109231187 - - Serine carboxypeptidase, putative [Ricinus communis]
6 Hb_011129_020 0.1257214125 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
7 Hb_004079_100 0.1270465699 - - PREDICTED: uncharacterized protein LOC105637705 [Jatropha curcas]
8 Hb_003875_040 0.1300274422 - - PREDICTED: endoglucanase 11-like [Jatropha curcas]
9 Hb_005333_080 0.1346048565 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005357_120 0.136099143 transcription factor TF Family: MYB-related -
11 Hb_004846_080 0.1364383231 - - DNA replication licensing factor MCM3, putative [Ricinus communis]
12 Hb_001776_070 0.1418748566 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
13 Hb_001252_070 0.1420034408 - - hypothetical protein JCGZ_01385 [Jatropha curcas]
14 Hb_003050_100 0.1440214854 - - PREDICTED: uncharacterized protein LOC105633987 [Jatropha curcas]
15 Hb_001597_030 0.1459867209 - - PREDICTED: uncharacterized protein LOC104445128 isoform X1 [Eucalyptus grandis]
16 Hb_000203_070 0.1473721649 - - PREDICTED: uncharacterized protein LOC105649674 [Jatropha curcas]
17 Hb_000749_120 0.1513739786 - - PREDICTED: uncharacterized protein LOC105644255 isoform X2 [Jatropha curcas]
18 Hb_005485_070 0.1516546759 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
19 Hb_009627_020 0.1530620954 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
20 Hb_000479_230 0.15388683 - - hypothetical protein JCGZ_19903 [Jatropha curcas]

Gene co-expression network

sample Hb_005839_030 Hb_005839_030 Hb_002592_050 Hb_002592_050 Hb_005839_030--Hb_002592_050 Hb_000696_030 Hb_000696_030 Hb_005839_030--Hb_000696_030 Hb_001157_190 Hb_001157_190 Hb_005839_030--Hb_001157_190 Hb_005144_080 Hb_005144_080 Hb_005839_030--Hb_005144_080 Hb_011129_020 Hb_011129_020 Hb_005839_030--Hb_011129_020 Hb_004079_100 Hb_004079_100 Hb_005839_030--Hb_004079_100 Hb_003050_100 Hb_003050_100 Hb_002592_050--Hb_003050_100 Hb_032208_050 Hb_032208_050 Hb_002592_050--Hb_032208_050 Hb_155444_010 Hb_155444_010 Hb_002592_050--Hb_155444_010 Hb_002025_050 Hb_002025_050 Hb_002592_050--Hb_002025_050 Hb_001178_090 Hb_001178_090 Hb_002592_050--Hb_001178_090 Hb_000696_030--Hb_001157_190 Hb_001776_070 Hb_001776_070 Hb_000696_030--Hb_001776_070 Hb_005679_110 Hb_005679_110 Hb_000696_030--Hb_005679_110 Hb_001195_740 Hb_001195_740 Hb_000696_030--Hb_001195_740 Hb_000696_030--Hb_005144_080 Hb_001157_190--Hb_001195_740 Hb_002918_120 Hb_002918_120 Hb_001157_190--Hb_002918_120 Hb_001597_030 Hb_001597_030 Hb_001157_190--Hb_001597_030 Hb_005731_070 Hb_005731_070 Hb_001157_190--Hb_005731_070 Hb_002025_380 Hb_002025_380 Hb_005144_080--Hb_002025_380 Hb_006277_030 Hb_006277_030 Hb_005144_080--Hb_006277_030 Hb_004282_010 Hb_004282_010 Hb_005144_080--Hb_004282_010 Hb_005144_080--Hb_005731_070 Hb_005144_080--Hb_011129_020 Hb_011129_020--Hb_004079_100 Hb_023956_010 Hb_023956_010 Hb_011129_020--Hb_023956_010 Hb_003847_050 Hb_003847_050 Hb_011129_020--Hb_003847_050 Hb_000479_230 Hb_000479_230 Hb_011129_020--Hb_000479_230 Hb_007625_030 Hb_007625_030 Hb_011129_020--Hb_007625_030 Hb_022250_160 Hb_022250_160 Hb_004079_100--Hb_022250_160 Hb_003411_020 Hb_003411_020 Hb_004079_100--Hb_003411_020 Hb_008566_080 Hb_008566_080 Hb_004079_100--Hb_008566_080 Hb_000120_320 Hb_000120_320 Hb_004079_100--Hb_000120_320 Hb_000594_160 Hb_000594_160 Hb_004079_100--Hb_000594_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.631766 5.28306 12.1596 18.7657 0.553518 0.692853
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.102017 0.137622 0.329051 14.7837 3.64561

CAGE analysis