Hb_000340_350

Information

Type -
Description -
Location Contig340: 285219-289467
Sequence    

Annotation

kegg
ID rcu:RCOM_0647060
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012092318.1
description PREDICTED: sugar transporter ERD6-like 7 isoform X1 [Jatropha curcas]
swissprot
ID P93051
description Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2
trembl
ID A0A067JND3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21996 PE=3 SV=1
Gene Ontology
ID GO:0005774
description sugar transporter erd6-like 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35566: 286140-289475 , PASA_asmbl_35567: 285161-289475
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000340_350 0.0 - - PREDICTED: sugar transporter ERD6-like 7 isoform X1 [Jatropha curcas]
2 Hb_000723_050 0.1085104062 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
3 Hb_033312_050 0.127109791 - - PREDICTED: uncharacterized protein LOC105638598, partial [Jatropha curcas]
4 Hb_000760_080 0.1434229211 - - mutt domain protein, putative [Ricinus communis]
5 Hb_001634_030 0.1450770405 - - Receptor like protein 1, putative [Theobroma cacao]
6 Hb_001300_180 0.1453206481 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
7 Hb_134174_010 0.146802274 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
8 Hb_083412_010 0.1482641576 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
9 Hb_000152_770 0.1524389986 - - PREDICTED: dynein light chain, cytoplasmic-like [Jatropha curcas]
10 Hb_002503_050 0.1567443098 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
11 Hb_004551_050 0.1579102408 - - PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic [Jatropha curcas]
12 Hb_001345_020 0.1620455491 - - hypothetical protein POPTR_0007s10400g [Populus trichocarpa]
13 Hb_001439_040 0.1646604225 - - PREDICTED: chorismate mutase 1, chloroplastic [Jatropha curcas]
14 Hb_003881_020 0.1651621526 - - PREDICTED: stellacyanin-like [Jatropha curcas]
15 Hb_002984_040 0.1651631043 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000501_110 0.1660126196 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Populus euphratica]
17 Hb_004627_020 0.1718543613 - - Protein MLO, putative [Ricinus communis]
18 Hb_009296_060 0.1727885608 - - glutathione s-transferase, putative [Ricinus communis]
19 Hb_001832_110 0.1741036534 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
20 Hb_002304_190 0.1741852841 - - PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Jatropha curcas]

Gene co-expression network

sample Hb_000340_350 Hb_000340_350 Hb_000723_050 Hb_000723_050 Hb_000340_350--Hb_000723_050 Hb_033312_050 Hb_033312_050 Hb_000340_350--Hb_033312_050 Hb_000760_080 Hb_000760_080 Hb_000340_350--Hb_000760_080 Hb_001634_030 Hb_001634_030 Hb_000340_350--Hb_001634_030 Hb_001300_180 Hb_001300_180 Hb_000340_350--Hb_001300_180 Hb_134174_010 Hb_134174_010 Hb_000340_350--Hb_134174_010 Hb_005730_070 Hb_005730_070 Hb_000723_050--Hb_005730_070 Hb_000723_050--Hb_033312_050 Hb_001454_290 Hb_001454_290 Hb_000723_050--Hb_001454_290 Hb_004551_050 Hb_004551_050 Hb_000723_050--Hb_004551_050 Hb_008554_090 Hb_008554_090 Hb_000723_050--Hb_008554_090 Hb_002304_190 Hb_002304_190 Hb_033312_050--Hb_002304_190 Hb_033312_050--Hb_000760_080 Hb_001349_020 Hb_001349_020 Hb_033312_050--Hb_001349_020 Hb_001832_110 Hb_001832_110 Hb_033312_050--Hb_001832_110 Hb_033312_050--Hb_005730_070 Hb_000017_320 Hb_000017_320 Hb_033312_050--Hb_000017_320 Hb_001048_100 Hb_001048_100 Hb_000760_080--Hb_001048_100 Hb_000024_130 Hb_000024_130 Hb_000760_080--Hb_000024_130 Hb_005568_050 Hb_005568_050 Hb_000760_080--Hb_005568_050 Hb_002503_050 Hb_002503_050 Hb_000760_080--Hb_002503_050 Hb_000731_210 Hb_000731_210 Hb_000760_080--Hb_000731_210 Hb_006294_030 Hb_006294_030 Hb_001634_030--Hb_006294_030 Hb_001634_030--Hb_004551_050 Hb_137272_010 Hb_137272_010 Hb_001634_030--Hb_137272_010 Hb_000567_060 Hb_000567_060 Hb_001634_030--Hb_000567_060 Hb_068804_070 Hb_068804_070 Hb_001634_030--Hb_068804_070 Hb_003881_020 Hb_003881_020 Hb_001634_030--Hb_003881_020 Hb_001300_180--Hb_134174_010 Hb_008899_030 Hb_008899_030 Hb_001300_180--Hb_008899_030 Hb_004627_020 Hb_004627_020 Hb_001300_180--Hb_004627_020 Hb_001345_020 Hb_001345_020 Hb_001300_180--Hb_001345_020 Hb_001300_180--Hb_000723_050 Hb_002984_040 Hb_002984_040 Hb_134174_010--Hb_002984_040 Hb_134174_010--Hb_003881_020 Hb_000501_110 Hb_000501_110 Hb_134174_010--Hb_000501_110 Hb_134174_010--Hb_001634_030 Hb_134174_010--Hb_137272_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0115395 10.3302 26.2593 8.63905 0.0108046 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.971334 1.25995 1.59955 24.761 9.30108

CAGE analysis