Hb_002984_040

Information

Type -
Description -
Location Contig2984: 69268-75399
Sequence    

Annotation

kegg
ID rcu:RCOM_1494400
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.13)
nr
ID XP_002516046.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9LV48
description Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=2 SV=1
trembl
ID B9RQM7
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1494400 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002984_040 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000501_110 0.0513656854 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Populus euphratica]
3 Hb_003881_020 0.1059109112 - - PREDICTED: stellacyanin-like [Jatropha curcas]
4 Hb_007676_040 0.1173602826 - - cellulose synthase, putative [Ricinus communis]
5 Hb_134174_010 0.127827166 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_123560_020 0.1283078872 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
7 Hb_006294_030 0.1287632817 - - alcohol dehydrogenase, putative [Ricinus communis]
8 Hb_083412_010 0.1335758534 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
9 Hb_000010_150 0.1347111368 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Jatropha curcas]
10 Hb_137272_010 0.1372828838 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
11 Hb_022092_050 0.137430191 - - PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica]
12 Hb_001634_030 0.1421344046 - - Receptor like protein 1, putative [Theobroma cacao]
13 Hb_005168_030 0.1447264566 - - unknown [Zea mays]
14 Hb_000471_030 0.145467768 - - -
15 Hb_000567_060 0.1473054044 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
16 Hb_068804_070 0.1509742694 - - hypothetical protein JCGZ_12627 [Jatropha curcas]
17 Hb_004703_010 0.1549305893 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
18 Hb_001918_030 0.1578825129 - - -
19 Hb_001345_010 0.1581717856 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
20 Hb_000723_050 0.1584191289 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]

Gene co-expression network

sample Hb_002984_040 Hb_002984_040 Hb_000501_110 Hb_000501_110 Hb_002984_040--Hb_000501_110 Hb_003881_020 Hb_003881_020 Hb_002984_040--Hb_003881_020 Hb_007676_040 Hb_007676_040 Hb_002984_040--Hb_007676_040 Hb_134174_010 Hb_134174_010 Hb_002984_040--Hb_134174_010 Hb_123560_020 Hb_123560_020 Hb_002984_040--Hb_123560_020 Hb_006294_030 Hb_006294_030 Hb_002984_040--Hb_006294_030 Hb_000501_110--Hb_007676_040 Hb_000501_110--Hb_003881_020 Hb_083412_010 Hb_083412_010 Hb_000501_110--Hb_083412_010 Hb_005542_040 Hb_005542_040 Hb_000501_110--Hb_005542_040 Hb_039022_020 Hb_039022_020 Hb_000501_110--Hb_039022_020 Hb_137272_010 Hb_137272_010 Hb_003881_020--Hb_137272_010 Hb_003881_020--Hb_083412_010 Hb_000567_060 Hb_000567_060 Hb_003881_020--Hb_000567_060 Hb_000482_070 Hb_000482_070 Hb_003881_020--Hb_000482_070 Hb_007676_040--Hb_005542_040 Hb_001345_010 Hb_001345_010 Hb_007676_040--Hb_001345_010 Hb_000108_090 Hb_000108_090 Hb_007676_040--Hb_000108_090 Hb_001634_080 Hb_001634_080 Hb_007676_040--Hb_001634_080 Hb_000521_360 Hb_000521_360 Hb_007676_040--Hb_000521_360 Hb_001300_180 Hb_001300_180 Hb_134174_010--Hb_001300_180 Hb_134174_010--Hb_003881_020 Hb_134174_010--Hb_000501_110 Hb_001634_030 Hb_001634_030 Hb_134174_010--Hb_001634_030 Hb_134174_010--Hb_137272_010 Hb_005168_030 Hb_005168_030 Hb_123560_020--Hb_005168_030 Hb_106321_010 Hb_106321_010 Hb_123560_020--Hb_106321_010 Hb_011440_010 Hb_011440_010 Hb_123560_020--Hb_011440_010 Hb_009486_120 Hb_009486_120 Hb_123560_020--Hb_009486_120 Hb_000336_280 Hb_000336_280 Hb_123560_020--Hb_000336_280 Hb_001186_120 Hb_001186_120 Hb_123560_020--Hb_001186_120 Hb_000471_030 Hb_000471_030 Hb_006294_030--Hb_000471_030 Hb_012691_010 Hb_012691_010 Hb_006294_030--Hb_012691_010 Hb_006294_030--Hb_001634_030 Hb_005834_050 Hb_005834_050 Hb_006294_030--Hb_005834_050 Hb_068804_070 Hb_068804_070 Hb_006294_030--Hb_068804_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.657543 1.86479 0.370982 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.48885 0.50579

CAGE analysis