Hb_001634_030

Information

Type -
Description -
Location Contig1634: 11444-14485
Sequence    

Annotation

kegg
ID tcc:TCM_007720
description Receptor like protein 1, putative
nr
ID XP_007043274.1
description Receptor like protein 1, putative [Theobroma cacao]
swissprot
ID Q9FIZ3
description LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2
trembl
ID A0A061E2C1
description Receptor like protein 1, putative OS=Theobroma cacao GN=TCM_007720 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001634_030 0.0 - - Receptor like protein 1, putative [Theobroma cacao]
2 Hb_006294_030 0.1198372955 - - alcohol dehydrogenase, putative [Ricinus communis]
3 Hb_004551_050 0.1253706282 - - PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic [Jatropha curcas]
4 Hb_137272_010 0.128009887 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
5 Hb_000567_060 0.128562644 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
6 Hb_068804_070 0.1333095727 - - hypothetical protein JCGZ_12627 [Jatropha curcas]
7 Hb_003881_020 0.1349846753 - - PREDICTED: stellacyanin-like [Jatropha curcas]
8 Hb_000471_030 0.1361785464 - - -
9 Hb_134174_010 0.1405640107 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_012691_010 0.142086249 - - hypothetical protein POPTR_0005s18750g [Populus trichocarpa]
11 Hb_002984_040 0.1421344046 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_000340_350 0.1450770405 - - PREDICTED: sugar transporter ERD6-like 7 isoform X1 [Jatropha curcas]
13 Hb_006262_030 0.1467426611 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
14 Hb_000018_090 0.1485371845 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_000152_770 0.1523616643 - - PREDICTED: dynein light chain, cytoplasmic-like [Jatropha curcas]
16 Hb_003759_040 0.1543699535 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
17 Hb_005834_050 0.1585102559 - - PREDICTED: cationic amino acid transporter 1-like [Jatropha curcas]
18 Hb_001776_130 0.1599093713 - - metallothionein [Hevea brasiliensis]
19 Hb_006266_010 0.1619377972 - - unnamed protein product [Vitis vinifera]
20 Hb_001918_030 0.1623533838 - - -

Gene co-expression network

sample Hb_001634_030 Hb_001634_030 Hb_006294_030 Hb_006294_030 Hb_001634_030--Hb_006294_030 Hb_004551_050 Hb_004551_050 Hb_001634_030--Hb_004551_050 Hb_137272_010 Hb_137272_010 Hb_001634_030--Hb_137272_010 Hb_000567_060 Hb_000567_060 Hb_001634_030--Hb_000567_060 Hb_068804_070 Hb_068804_070 Hb_001634_030--Hb_068804_070 Hb_003881_020 Hb_003881_020 Hb_001634_030--Hb_003881_020 Hb_000471_030 Hb_000471_030 Hb_006294_030--Hb_000471_030 Hb_012691_010 Hb_012691_010 Hb_006294_030--Hb_012691_010 Hb_005834_050 Hb_005834_050 Hb_006294_030--Hb_005834_050 Hb_006294_030--Hb_068804_070 Hb_002984_040 Hb_002984_040 Hb_006294_030--Hb_002984_040 Hb_005332_010 Hb_005332_010 Hb_004551_050--Hb_005332_010 Hb_022092_050 Hb_022092_050 Hb_004551_050--Hb_022092_050 Hb_004551_050--Hb_000567_060 Hb_000723_050 Hb_000723_050 Hb_004551_050--Hb_000723_050 Hb_004525_110 Hb_004525_110 Hb_004551_050--Hb_004525_110 Hb_137272_010--Hb_003881_020 Hb_137272_010--Hb_000567_060 Hb_000018_090 Hb_000018_090 Hb_137272_010--Hb_000018_090 Hb_006266_010 Hb_006266_010 Hb_137272_010--Hb_006266_010 Hb_000482_070 Hb_000482_070 Hb_137272_010--Hb_000482_070 Hb_000189_160 Hb_000189_160 Hb_137272_010--Hb_000189_160 Hb_000567_060--Hb_000018_090 Hb_000567_060--Hb_003881_020 Hb_002871_050 Hb_002871_050 Hb_000567_060--Hb_002871_050 Hb_000567_060--Hb_000482_070 Hb_001345_020 Hb_001345_020 Hb_000567_060--Hb_001345_020 Hb_005743_010 Hb_005743_010 Hb_068804_070--Hb_005743_010 Hb_003592_060 Hb_003592_060 Hb_068804_070--Hb_003592_060 Hb_068804_070--Hb_006266_010 Hb_068804_070--Hb_000471_030 Hb_004316_080 Hb_004316_080 Hb_068804_070--Hb_004316_080 Hb_002217_060 Hb_002217_060 Hb_068804_070--Hb_002217_060 Hb_083412_010 Hb_083412_010 Hb_003881_020--Hb_083412_010 Hb_003881_020--Hb_000482_070 Hb_000501_110 Hb_000501_110 Hb_003881_020--Hb_000501_110 Hb_003881_020--Hb_002984_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.754922 2.71586 0.61803 0 0.0165989
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0431045 0.0339164 0.0321933 1.28813 0.538226

CAGE analysis