Hb_022092_050

Information

Type -
Description -
Location Contig22092: 28558-32121
Sequence    

Annotation

kegg
ID pop:POPTR_0019s13480g
description hypothetical protein
nr
ID XP_011039756.1
description PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica]
swissprot
ID -
description -
trembl
ID A0A067JMY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25830 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022092_050 0.0 - - PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica]
2 Hb_002304_190 0.1059700334 - - PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Jatropha curcas]
3 Hb_009486_120 0.1100432259 - - hypothetical protein PRUPE_ppa004149mg [Prunus persica]
4 Hb_000696_250 0.1109835188 - - PREDICTED: patellin-6 [Jatropha curcas]
5 Hb_001349_020 0.11468117 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
6 Hb_000018_120 0.1183090931 - - ankyrin repeat-containing protein, putative [Ricinus communis]
7 Hb_001832_110 0.1225681635 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
8 Hb_068804_070 0.1284317035 - - hypothetical protein JCGZ_12627 [Jatropha curcas]
9 Hb_004525_110 0.1296391314 - - hypothetical protein POPTR_0007s12850g [Populus trichocarpa]
10 Hb_004551_050 0.130729671 - - PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic [Jatropha curcas]
11 Hb_005730_070 0.1315481877 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
12 Hb_003881_020 0.1329903595 - - PREDICTED: stellacyanin-like [Jatropha curcas]
13 Hb_033312_050 0.1337937298 - - PREDICTED: uncharacterized protein LOC105638598, partial [Jatropha curcas]
14 Hb_002685_100 0.1342417867 - - low temperature inducible SLTI66 [Glycine max]
15 Hb_123560_020 0.1343867487 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
16 Hb_005679_110 0.1353974075 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
17 Hb_000567_060 0.1357841847 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
18 Hb_002984_040 0.137430191 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_006573_260 0.13964038 - - -
20 Hb_000336_280 0.1401295093 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]

Gene co-expression network

sample Hb_022092_050 Hb_022092_050 Hb_002304_190 Hb_002304_190 Hb_022092_050--Hb_002304_190 Hb_009486_120 Hb_009486_120 Hb_022092_050--Hb_009486_120 Hb_000696_250 Hb_000696_250 Hb_022092_050--Hb_000696_250 Hb_001349_020 Hb_001349_020 Hb_022092_050--Hb_001349_020 Hb_000018_120 Hb_000018_120 Hb_022092_050--Hb_000018_120 Hb_001832_110 Hb_001832_110 Hb_022092_050--Hb_001832_110 Hb_002685_100 Hb_002685_100 Hb_002304_190--Hb_002685_100 Hb_002304_190--Hb_001832_110 Hb_033312_050 Hb_033312_050 Hb_002304_190--Hb_033312_050 Hb_000336_280 Hb_000336_280 Hb_002304_190--Hb_000336_280 Hb_000017_320 Hb_000017_320 Hb_002304_190--Hb_000017_320 Hb_002304_190--Hb_009486_120 Hb_123560_020 Hb_123560_020 Hb_009486_120--Hb_123560_020 Hb_009486_120--Hb_000336_280 Hb_009486_120--Hb_001832_110 Hb_009486_120--Hb_002685_100 Hb_001832_140 Hb_001832_140 Hb_000696_250--Hb_001832_140 Hb_000696_250--Hb_000018_120 Hb_001252_050 Hb_001252_050 Hb_000696_250--Hb_001252_050 Hb_000696_250--Hb_001349_020 Hb_009767_030 Hb_009767_030 Hb_000696_250--Hb_009767_030 Hb_005679_110 Hb_005679_110 Hb_001349_020--Hb_005679_110 Hb_001345_020 Hb_001345_020 Hb_001349_020--Hb_001345_020 Hb_001349_020--Hb_000017_320 Hb_005730_070 Hb_005730_070 Hb_001349_020--Hb_005730_070 Hb_002003_010 Hb_002003_010 Hb_001349_020--Hb_002003_010 Hb_003592_060 Hb_003592_060 Hb_000018_120--Hb_003592_060 Hb_000018_120--Hb_001832_110 Hb_000941_010 Hb_000941_010 Hb_000018_120--Hb_000941_010 Hb_000018_120--Hb_000336_280 Hb_001832_110--Hb_000336_280 Hb_001832_110--Hb_002685_100 Hb_001226_100 Hb_001226_100 Hb_001832_110--Hb_001226_100 Hb_001439_040 Hb_001439_040 Hb_001832_110--Hb_001439_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0348853 0.699622 3.25523 1.23 0.0521297 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.08631 0.708724

CAGE analysis