Hb_009767_030

Information

Type -
Description -
Location Contig9767: 18144-21545
Sequence    

Annotation

kegg
ID pop:POPTR_0010s09860g
description POPTRDRAFT_1090294; hypothetical protein
nr
ID XP_012069615.1
description PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
swissprot
ID Q55CU8
description Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1
trembl
ID B9HV57
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09860g PE=4 SV=2
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009767_030 0.0 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
2 Hb_000696_250 0.1060834495 - - PREDICTED: patellin-6 [Jatropha curcas]
3 Hb_001252_050 0.1149252767 - - Wall-associated receptor kinase-like 20 [Morus notabilis]
4 Hb_072997_010 0.121220673 - - hypothetical protein JCGZ_18743 [Jatropha curcas]
5 Hb_001002_090 0.1221355076 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
6 Hb_001776_070 0.1289453352 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
7 Hb_021888_010 0.1317277487 - - PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Jatropha curcas]
8 Hb_000417_140 0.1318486364 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
9 Hb_055440_010 0.1326049378 - - protein binding protein, putative [Ricinus communis]
10 Hb_004096_010 0.1347919918 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 40 [Jatropha curcas]
11 Hb_008143_060 0.1357802674 - - PREDICTED: putative hydrolase C777.06c isoform X2 [Jatropha curcas]
12 Hb_001349_020 0.1383303 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
13 Hb_005730_070 0.1385911346 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
14 Hb_001454_290 0.1394616678 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
15 Hb_000567_060 0.142055213 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
16 Hb_022092_050 0.1427436085 - - PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica]
17 Hb_005679_110 0.1429610796 - - PREDICTED: uncharacterized protein DDB_G0271670 [Jatropha curcas]
18 Hb_010598_010 0.1478350537 - - PREDICTED: ankyrin-1-like [Jatropha curcas]
19 Hb_013358_030 0.1487403356 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
20 Hb_000343_220 0.1496869047 - - hypothetical protein CISIN_1g037489mg [Citrus sinensis]

Gene co-expression network

sample Hb_009767_030 Hb_009767_030 Hb_000696_250 Hb_000696_250 Hb_009767_030--Hb_000696_250 Hb_001252_050 Hb_001252_050 Hb_009767_030--Hb_001252_050 Hb_072997_010 Hb_072997_010 Hb_009767_030--Hb_072997_010 Hb_001002_090 Hb_001002_090 Hb_009767_030--Hb_001002_090 Hb_001776_070 Hb_001776_070 Hb_009767_030--Hb_001776_070 Hb_021888_010 Hb_021888_010 Hb_009767_030--Hb_021888_010 Hb_001832_140 Hb_001832_140 Hb_000696_250--Hb_001832_140 Hb_000018_120 Hb_000018_120 Hb_000696_250--Hb_000018_120 Hb_000696_250--Hb_001252_050 Hb_001349_020 Hb_001349_020 Hb_000696_250--Hb_001349_020 Hb_022092_050 Hb_022092_050 Hb_000696_250--Hb_022092_050 Hb_000343_220 Hb_000343_220 Hb_001252_050--Hb_000343_220 Hb_008143_050 Hb_008143_050 Hb_001252_050--Hb_008143_050 Hb_006711_040 Hb_006711_040 Hb_001252_050--Hb_006711_040 Hb_000417_140 Hb_000417_140 Hb_001252_050--Hb_000417_140 Hb_008143_060 Hb_008143_060 Hb_001252_050--Hb_008143_060 Hb_055440_010 Hb_055440_010 Hb_072997_010--Hb_055440_010 Hb_004096_010 Hb_004096_010 Hb_072997_010--Hb_004096_010 Hb_072997_010--Hb_001002_090 Hb_010598_010 Hb_010598_010 Hb_072997_010--Hb_010598_010 Hb_001288_020 Hb_001288_020 Hb_072997_010--Hb_001288_020 Hb_001002_090--Hb_055440_010 Hb_000979_080 Hb_000979_080 Hb_001002_090--Hb_000979_080 Hb_000187_110 Hb_000187_110 Hb_001002_090--Hb_000187_110 Hb_001002_090--Hb_001776_070 Hb_010164_020 Hb_010164_020 Hb_001776_070--Hb_010164_020 Hb_000696_030 Hb_000696_030 Hb_001776_070--Hb_000696_030 Hb_027556_060 Hb_027556_060 Hb_001776_070--Hb_027556_060 Hb_005679_110 Hb_005679_110 Hb_001776_070--Hb_005679_110 Hb_001776_070--Hb_001349_020 Hb_005144_080 Hb_005144_080 Hb_001776_070--Hb_005144_080 Hb_001158_110 Hb_001158_110 Hb_021888_010--Hb_001158_110 Hb_006573_260 Hb_006573_260 Hb_021888_010--Hb_006573_260 Hb_021888_010--Hb_001002_090 Hb_002081_220 Hb_002081_220 Hb_021888_010--Hb_002081_220 Hb_021888_010--Hb_000187_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0165399 0.381864 2.07319 1.24966 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0296941 0 1.78234 0.184962

CAGE analysis